Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00267 ATGAGTTGCTTCTCATGTTTTTCATCCCATGAAAAAAAGTCAAGGAGAACAAATAGCAGAAGAGGAAGTCAGCTCCCTACAGAAGCTCCAAGTCGAGAGACATCATCCCCACAGCAAAATCTAGATACGCCTAACCCCAGCAGCAATGTACAATCTGATGTTCGAGCCAACACGGATACTACCAAAGAAGCTGGGAACATCGCTGCAGAGACTTTCACTTTCCGTGAATTAGCTGCAGCGACAAAGAATTTCAGACAGGAATGTTTAATTGGCGAAGGTGGATTTGGAAGAGTTTATAAAGGGAAACTTGACAAAACTTCCCAGGTTGTGGCTGTGAAGCAACTTGACCGAAATGGATTGCAAGGAAACAGGGAGTTCCTTATTGAAGTCTTAATGTTGAGTCTTTTACACCATCAAAATCTAGTGAATCTCATTGGATACTGTGCTGATGGAGATCAGAGACTTTTGGTTTATGAGTACATGCCTTTAGGCTCCCTAGAAGACCATCTATTTGAACTAGGACCAAAGCAAAAGCCATTAAACTGGTTCCAAAGAATGAGAATAGCTTTAGAAGCAGCCAAAGGTCTTGAATACTTGCATGACAAGGCGAACCCTCCTGTCATCTACCGCGATTTGAAGTCCTCCAATATCTTGCTGGATTCTGAGTACAATGCAAAGCTTTCTGATTTTGGCCTGGCCAAGCTTGGACCCACTGGAGACAAGACACATGTTTCTTCAAGGGTAATGGGGACATATGGCTATTGTGCCCCAGAATATCAAAGAACTGGTCATCTCACTGTAAAATCAGATGTATACAGCTTTGGAGTCGTTTTGTTAGAATTGATCTCAGGAAAGAGAGTCATTGACACCACTAGACCAAATGATGAACAAAACTTAATTTCTTGGGCAGATCCAGTGTTCAAGAACCCTTCTAGATTTTCAGAATTAGCTGATCCTCTTCTTGAAGGAGACTTCCCAACTAGAGGGTTGAATCAAGCAGTGGCAGTTTCAGCAATGTGCCTTAATGAGGAACCAGCAGTCAGACCCTTAATCAGTGATGTTGTGTCTGCTCTCAGTTTCCTTGGTGTAACTCCAGAATCAGATGACCCTGTGAGTCTTCCCCTTCCACCATCAGATCAACAATCTTCAGAAGAAAATGGCGATCAAGGTGATGCAAATCAAACAGAACGGCAGAGAGCTGTAGCAGAAGCCATGGAGTGGGGTTCCAATTCCAGGGACAATGCTGTTGTATCACAGGGTGAAAATGAAAATGAATGA 1278 0.4304 MSCFSCFSSHEKKSRRTNSRRGSQLPTEAPSRETSSPQQNLDTPNPSSNVQSDVRANTDTTKEAGNIAAETFTFRELAAATKNFRQECLIGEGGFGRVYKGKLDKTSQVVAVKQLDRNGLQGNREFLIEVLMLSLLHHQNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLFELGPKQKPLNWFQRMRIALEAAKGLEYLHDKANPPVIYRDLKSSNILLDSEYNAKLSDFGLAKLGPTGDKTHVSSRVMGTYGYCAPEYQRTGHLTVKSDVYSFGVVLLELISGKRVIDTTRPNDEQNLISWADPVFKNPSRFSELADPLLEGDFPTRGLNQAVAVSAMCLNEEPAVRPLISDVVSALSFLGVTPESDDPVSLPLPPSDQQSSEENGDQGDANQTERQRAVAEAMEWGSNSRDNAVVSQGENENE* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00267 425 MobiDBLite consensus disorder prediction 411 425 - -
Pte6g00267 425 SMART serkin_6 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00267 425 ProSiteProfiles Protein kinase domain profile. 84 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00267 425 MobiDBLite consensus disorder prediction 20 62 - -
Pte6g00267 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Pte6g00267 425 MobiDBLite consensus disorder prediction 366 425 - -
Pte6g00267 425 SUPERFAMILY Protein kinase-like (PK-like) 70 380 IPR011009 -
Pte6g00267 425 Pfam Protein kinase domain 86 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00267 425 PANTHER OS07G0668900 PROTEIN 3 367 - -
Pte6g00267 425 FunFam Serine/threonine-protein kinase PBS1 161 372 - -
Pte6g00267 425 MobiDBLite consensus disorder prediction 1 62 - -
Pte6g00267 425 FunFam Serine/threonine-protein kinase PBS1 57 160 - -
Pte6g00267 425 Gene3D Phosphorylase Kinase; domain 1 45 160 - -
Pte6g00267 425 ProSitePatterns Protein kinases ATP-binding region signature. 90 113 IPR017441 GO:0005524
Pte6g00267 425 Gene3D Transferase(Phosphotransferase) domain 1 161 367 - -
Pte6g00267 425 MobiDBLite consensus disorder prediction 374 396 - -
Pte6g00267 425 CDD STKc_IRAK 90 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00267 Pte-Chr6 2800790 2802801 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00267 1 412 Glycoside Hydrolase AT3G07070 68.447 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte6g00267 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00267 - - cpap:110821869 622.854