Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00259 ATGGAAGATCATGAAGAAATTACAGTAGCCCATATTGCAGGAACTAGCAAAGAGGAAGATACCTCCTCCAGAGTTTTCCCTTGCTTATTCTGTTCAAGAAAGTTCTACAGCTCTCAAGCCCTAGGAGGACACCAAAATGCTCACAAGAAAGAGAGGACAGCTGCAAGAAAAGCTAAAAGGGCATCTGAATATACACCTCTTTCCTATGCATCAGCCATACCACCAGCAATGGTTTTTTCGCCAAGCCATTCTCATTTGGGTGTAATGAATCCATCTGTGTACATCACTGCCCATTCAGCTAACTTTCGTTATCTTCCTGCTACCAATCAAATTTCAGACCAATTTGGATCAAATGCTGCACCTAGGTTTGCCAATGCTTTCTACTGTGATGATGGGTGTTCAAGCAGTAATCGTTTGTACGAAGGCGATGAAAACAAGAGCTGGCAAAAGAGCATACGGTCCAATCAATTCAACAGAGAGGCTTCTGCAAACCATATGTCAAAGATGAGCAACGGTCATAGTAATAGTCTCGGGAATAGGGTTAGTGGTAGTAAAGACAAAGATCAGAAACTTGATCTGTCCCTCCATTTGTAG 594 0.4242 MEDHEEITVAHIAGTSKEEDTSSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKRASEYTPLSYASAIPPAMVFSPSHSHLGVMNPSVYITAHSANFRYLPATNQISDQFGSNAAPRFANAFYCDDGCSSSNRLYEGDENKSWQKSIRSNQFNREASANHMSKMSNGHSNSLGNRVSGSKDKDQKLDLSLHL* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00259 197 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 15 197 IPR044246 GO:0009788
Pte6g00259 197 MobiDBLite consensus disorder prediction 166 182 - -
Pte6g00259 197 MobiDBLite consensus disorder prediction 166 197 - -
Pte6g00259 197 SUPERFAMILY beta-beta-alpha zinc fingers 22 53 IPR036236 -
Pte6g00259 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Pte6g00259 197 MobiDBLite consensus disorder prediction 183 197 - -
Pte6g00259 197 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
Pte6g00259 197 Gene3D Classic Zinc Finger 4 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00259 Pte-Chr6 2709468 2710061 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00259 1 89 C2H2 Transcription Factor Family AT5G48890 52.041 7.45e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00259 - - qsa:O6P43_016819 207.994