Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00251 ATGACAAGTACAATGTCTCTATCATATTCATCAAGATGGTGTCCAACCCCAGAACAGGTTATGATCTTGGAGGAATTATACAGAAATGGGATTAGGACTCCCGATGCTTCACATATTCAACGAATTACAGCACAGCTTTCTTTCTATGGTAAGATAGCTGGCAAGAATGTTTTCTACTGGTTTCAAAACCACAAGGCCAGGGACAGGCAGAAGCTGAGGAGGAAGCTCACCAAGAAACTTCAGGTACAGCAGCAGAAGTTGCATCCATGTTATCAACATCATGATAAGATTCATCAGCAGAATGGCTTAGGTTTTGATCAATCTCCATTTTCTACTCAACAACCTTGCTATAGTAACGCAGCTCACTTTCTTCTTCATGAGAGAGCAACGGTAGTGGAAGTACAATCAAATGTAGGTCCAGGTTACAAATGGTGGATGAGTAAGAGACAAAGTGTGATGGAGGAAAAAATGATGAGATTGTATGATGATGGAGGCTATGGATGCAGCAGTTCACCAAAGACTCTAGAACTTTTTCCAACCACAGCAGCCGCACTAAAAGAAGATAGCAACTCTCTCCAGAATCTCTCTCATCTCCCGAAAATGAGTTAA 609 0.4154 MTSTMSLSYSSRWCPTPEQVMILEELYRNGIRTPDASHIQRITAQLSFYGKIAGKNVFYWFQNHKARDRQKLRRKLTKKLQVQQQKLHPCYQHHDKIHQQNGLGFDQSPFSTQQPCYSNAAHFLLHERATVVEVQSNVGPGYKWWMSKRQSVMEEKMMRLYDDGGYGCSSSPKTLELFPTTAAALKEDSNSLQNLSHLPKMS* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00251 202 CDD homeodomain 12 71 IPR001356 GO:0003677
Pte6g00251 202 SMART HOX_1 8 75 IPR001356 GO:0003677
Pte6g00251 202 ProSiteProfiles 'Homeobox' domain profile. 6 71 IPR001356 GO:0003677
Pte6g00251 202 FunFam WUSCHEL-related homeobox 11 10 77 - -
Pte6g00251 202 Pfam Homeodomain 11 70 IPR001356 GO:0003677
Pte6g00251 202 Gene3D - 8 71 - -
Pte6g00251 202 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 3 188 IPR044555 GO:0003700|GO:0099402
Pte6g00251 202 SUPERFAMILY Homeodomain-like 11 71 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00251 Pte-Chr6 2662838 2663681 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00251 5 78 Wox Gene Family AT2G28610 77.027 6.17e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte6g00251 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00251 - - tcc:18590803 164.851