Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00247 ATGGCAACTGCTAGCGATTACTCCGATGCACCAAAAATTGTAAAAGCTGTCACTCCAGCGAAACATTTGAACCACATTTCGATTTCCAAGGTCAGGGTTGTCGTAAGGGTTCGACCATTTCTTGAGCACGATGTGTCAGCACAAAATCGCCACCCAATTTCTTGCATTTCTGTCTCAGGCCAAGACTGTGAGTCCGGCGAAGAAGTTGCTGTTTATCTTAAAGACCCAGATTCCAGTCGAAAGGAGTGCTACAAGTTGGATTCTTTCTTTGACCAAGAGGAGAACAACTTGACTCGGATCTTTTATAGGGAAGTGAGCCCTTTGATTCCTGGTATCTTTGATGGCTGCAATGCCACTGTGTTCGCTTACGGAGCTACTGGTAGTGGAAAAACATTCACTATGCAGGGAACTGATGACCAACCGGGATTGATGTCCTTAGCAGTATCAACAATCCTGTCTCTTAGCCAGAAATGTGGTAGCACAGTACAGATTTCATATTTTGAAGTCTACATGGATAGGTGTTATGATCTTCTGGAGGTTAAAGAAAATGAAATAGTAGTTTTAGACGACAAAGATGGCCAAACTCATCTTAAAGGGTTATCTTGTGTCCCTATAAAGTCAATGTCTGATTTCAGAGAAGTATTCTCCAGTGGTGTACAAAGGAGAAAGGTGGCACACACTGGTCTTAATGACGTTTCTAGCAGAAGTCATGGAGTTCTTGTGGTTTCTGTCTCCACTCCTTGTGGTGATGGTAATGGAACTGTTGTTAGTGGAAAGCTGAATCTTATAGACTTGGCAGGTAATGAAGACAACAGAAGGACCTGTAATGAAGGTATTCGGCTCCAAGAAAGTGCCAAGATAAATCAGTCATTGTTTGCATTATCAAATGTTATCTATGCACTGAACAACAACAAGCACCGAGTACCGTACCGAGAAAGCAAATTGACTCGTATACTGCAAGATTCTCTTGGAGGATCTAGCCGTGCCTTGATGGTTGCTTGCCTGAATCCAGGAGTGTACCAGGAATCTGTGCATACTGTCAGTCTAGCTGCTCGATCGAGACATGTCTCAAATTTTGTTGTTTCAACTCGAAGGCTAGAAACCCCCGAAATTAAAGTTGACATGGAGGCAAAATTGCGTGCATGGCTGGAATCAAAGGGGAAGACAAAAAGTTCACAAAAGATTGGAACCTTCACTTCTCCTTGGAGAAAAACTCCCAGTTCTCTTAGTACTGCTAAAAAATCTGCTATACATGAAAAGTCATTCAAAGGAGAAAATTCAACCAATCAATTTGCAGTGAACAGGGTTCTTGATGTGGCTTTTAGTAACCTGCACGATGACACAGGACCACTTGATTTTCCCTTGGAGGTTAGTTGTACTAAACATGTAGTACATGTACTGAACAACTTTTTAGTCATCCTCAAAAAGCGCAGGTTCTGTTAG 1443 0.422 MATASDYSDAPKIVKAVTPAKHLNHISISKVRVVVRVRPFLEHDVSAQNRHPISCISVSGQDCESGEEVAVYLKDPDSSRKECYKLDSFFDQEENNLTRIFYREVSPLIPGIFDGCNATVFAYGATGSGKTFTMQGTDDQPGLMSLAVSTILSLSQKCGSTVQISYFEVYMDRCYDLLEVKENEIVVLDDKDGQTHLKGLSCVPIKSMSDFREVFSSGVQRRKVAHTGLNDVSSRSHGVLVVSVSTPCGDGNGTVVSGKLNLIDLAGNEDNRRTCNEGIRLQESAKINQSLFALSNVIYALNNNKHRVPYRESKLTRILQDSLGGSSRALMVACLNPGVYQESVHTVSLAARSRHVSNFVVSTRRLETPEIKVDMEAKLRAWLESKGKTKSSQKIGTFTSPWRKTPSSLSTAKKSAIHEKSFKGENSTNQFAVNRVLDVAFSNLHDDTGPLDFPLEVSCTKHVVHVLNNFLVILKKRRFC* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00247 480 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 369 IPR027417 -
Pte6g00247 480 ProSiteProfiles Kinesin motor domain profile. 30 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 PRINTS Kinesin heavy chain signature 115 136 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 PRINTS Kinesin heavy chain signature 227 244 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 PRINTS Kinesin heavy chain signature 308 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 PRINTS Kinesin heavy chain signature 259 277 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 29 363 IPR027640 GO:0003777|GO:0007018
Pte6g00247 480 SMART kinesin_4 28 364 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 FunFam Kinesin-like protein 27 396 - -
Pte6g00247 480 Pfam Kinesin motor domain 36 356 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pte6g00247 480 ProSitePatterns Kinesin motor domain signature. 258 269 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pte6g00247 480 Gene3D Kinesin motor domain 27 397 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00247 Pte-Chr6 2645937 2648816 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00247 30 388 Calmodulin-binding Proteins AT5G65930 29.891 3.50e-44 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00247 K10403 - qsa:O6P43_026528 625.935