Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00238 ATGCAAACGTATATGGATAGTTTGATTCAACTTGCTGGTTGGCAAGTTTGGGATGGTGACTTTGCATTGAGCACATTGTACTATGCAGAGTTCAATAACACAGCACCGAGGCATACCGAGTCTGCTCCTCCACGAAAGGCTGTGAAGCTAAGTCGCAGCTCGGAGAAGAGGAACTATTTCCTCAAGAAATGCGCCGAGCTCGTGCGAAGGAAGGAAGGAGGTGACTTGCTGTCAGCGGGAGGAGTGATTCTCAGCAGCAACTTCCATTGGGTTCTCAGCACGGAGAAGAGGAACTGGCTTGGAGTCGTGCGAAGGAATGAAGGAGCTGATTTGCTGTCGGGCTTCTCTGGTTCTTCAAGCAGCGTGAGGGTTGTATCGCAGTCGGGCTTCTCTGGTTCTTGTTGGGCGAGAATGGTAGCAAGGAAGGAAGGAGGTGGTTCTTTGAGGAAGGGAGGTCGAAGGGAGGGGTCAATCATTCTAGAGATGGCGTCTAAGGATACCAAGCAAGGTATTGCCACTGCTAATGGTAGTGGTGGTGGGTTTTTTGCTTCAATTGCTTCGAGTTTGGCCAATTTCGGTACTGCCATGACCAAATCTGTTAATGGTTTGGTTGGTTATGAGGGGTTGGAGGTTATTAATCCCGAAGGAGGAAATGAAGATGCTGAAGAGGAAGCAAGGAAAGGACGATGGAAACAGGAGGATCGAGACAGTTACTGGAAAATGATGCAAAAATATATTGGTTCAGATGTTACATCAATGGTTACACTTCCTGTTCTCATCTTTGAGCCAATGACAATGCTGCAGAAAATGGCTGAGCTGATGGAGTACACCTACCTGTTAGATATGGCAGATGAATGTGAGGATCCATACATGCGATTAGTGTATGCTTCATCATTTTTCATATCTGTCTACTATGCCTTGCAAAGGACATGGAAGCCGTTCAATCCTATTCTTGGAGAGACTTATGAAATGGTCAATCATGGTGGCATTACATTTATAGCTGAGCAGGTCTGTCATCACCCTCCAATAAGTGCTGGGCATGCTGAAAATGAACATTTCACCTACGATATAACATCAAAAGTGAAGACCAAGTTCCTTGGAAACTCAATTGATATATATCCCCTTGGAAGGACCCGTGTCACTCTCAAAAGAGATGGTGTAGTCCTTGATTTAGTGCCCCCTCCAACAAAAGTTAACAACTTGATCTTTGGACGGACATGGATTGACTCAGCTGGGGAGATGGTCTTGACAAATATGACCACAGGGGACAAAGTGGTGCTATATTTTCAACCATGTGGCTGGTTTGGAGCTGGTAGGTACGAAGTAGATGGTTATGTATATAATGCTACGGAAGAACCTAAGATTTTGATTACTGGGAAGTGGAATGAGTCACTGAGTTATCAGCCATGTGATTCTGAAGGAGAACCACTCCCAGGATCCGAGCTCAAAGAGTCTTGGAGGGTTGCAGATGCTCCAGAAAAAGATAAATTCCAATATACATATTTTGCACACAAGATAAATAGCTTCGACACTGCTCCTAAAAAGTTACTGGCTTCAGATTCACGTTTGCGCCCTGATAGGGCTGCGCTTGAGGAAGGTGATTTATCTAAAGCTGGAAATGAGAAGAGCAGTATGGAAGAAAGACAGAGAGCTGAGAAAAGAAGCAGGGAATCTCAGGGCCAGAAGTTCATTCCCAGGTGGTTTGACCATACCAGTGAAGTTGCTCCTACACCATGGGGTGAGTTGGAAATATACGAATTCAATGGTAAATATACCAAACACAGGGCTGATATAGACAGTTCTGATATCATTGAAGGAGGCAGCAATGAAACAGAGTTCAACCCTTGGCAGTATGAAAATCTTGATGTTGCATGA 1875 0.4485 MQTYMDSLIQLAGWQVWDGDFALSTLYYAEFNNTAPRHTESAPPRKAVKLSRSSEKRNYFLKKCAELVRRKEGGDLLSAGGVILSSNFHWVLSTEKRNWLGVVRRNEGADLLSGFSGSSSSVRVVSQSGFSGSCWARMVARKEGGGSLRKGGRREGSIILEMASKDTKQGIATANGSGGGFFASIASSLANFGTAMTKSVNGLVGYEGLEVINPEGGNEDAEEEARKGRWKQEDRDSYWKMMQKYIGSDVTSMVTLPVLIFEPMTMLQKMAELMEYTYLLDMADECEDPYMRLVYASSFFISVYYALQRTWKPFNPILGETYEMVNHGGITFIAEQVCHHPPISAGHAENEHFTYDITSKVKTKFLGNSIDIYPLGRTRVTLKRDGVVLDLVPPPTKVNNLIFGRTWIDSAGEMVLTNMTTGDKVVLYFQPCGWFGAGRYEVDGYVYNATEEPKILITGKWNESLSYQPCDSEGEPLPGSELKESWRVADAPEKDKFQYTYFAHKINSFDTAPKKLLASDSRLRPDRAALEEGDLSKAGNEKSSMEERQRAEKRSRESQGQKFIPRWFDHTSEVAPTPWGELEIYEFNGKYTKHRADIDSSDIIEGGSNETEFNPWQYENLDVA* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00238 624 MobiDBLite consensus disorder prediction 527 560 - -
Pte6g00238 624 Gene3D - 1 68 IPR012334 -
Pte6g00238 624 Gene3D - 320 495 - -
Pte6g00238 624 FunFam oxysterol-binding protein-related protein 3C 319 496 - -
Pte6g00238 624 Pfam Oxysterol-binding protein 237 595 IPR000648 GO:0008289
Pte6g00238 624 Gene3D - 527 612 - -
Pte6g00238 624 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 174 595 IPR000648 GO:0008289
Pte6g00238 624 MobiDBLite consensus disorder prediction 527 562 - -
Pte6g00238 624 ProSitePatterns Oxysterol-binding protein family signature. 335 346 IPR018494 -
Pte6g00238 624 Pfam Pectinesterase 1 39 IPR000070 GO:0030599|GO:0042545
Pte6g00238 624 SUPERFAMILY Oxysterol-binding protein-like 232 604 IPR037239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00238 Pte-Chr6 2576786 2583631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00238 1 36 Carbohydrate Esterase AT2G47550 66.667 3.16e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00238 - - qsa:O6P43_026510 813.913