Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00237 ATGGACAACAATGTAGACCGACGACAAATTTCCATATTTGTGAACTCAGACGCAGCTCTGGTGAATCTATCATTGGATAAGGTGAACAAGAACAAAATCGTAGGGTCAGGAGTGGTTCCTCCATTGATTTATGTGTTGAGAGGTGGATACCCTCAGTCACAGGAACACGCTTGTGGTGCACTTTTCAGCTTAGCCCTTGACGATGACAGCAAGACTGCAATTGGGGTATTGGGAGCTTTGCCGCCGTTGATTCATTTGCTACGATCTGATTGTGAGCGGACTCGGCATGAATCAGCACTCGCCCTATATCATCTTTCCCTAGTTCAAAGCAACCAGACCAAGTTGACCAAACTCGGATCGGTTCCTCTTCTAATGGACATGGTGAAGTCATATCACATGACGAGTCGGATTCTGCTCATTTTGGGCAACTTAGCTGCGGGTGTGGATGGACCTTCCGCATTGTTGGATGCGAGTGCAGTGGAGCACTTGGTCGGGTTATTAGATGAGAAAGAGCCCGTGTCTGGGTCAACCTGTGAGAGCTGTGTTGCAGTGTTGTATGCACTGAGTCGTGGTGGATTGAGATTCAAGGCACTGGCCATGGCGGCCAGAGCGGTGGAGGTGTTGAGGAAGGTTGAGAAAGTAGGAAGTGAAAGAATCATGGTACCTGAGAATCGTACCCTTTGA 684 0.4854 MDNNVDRRQISIFVNSDAALVNLSLDKVNKNKIVGSGVVPPLIYVLRGGYPQSQEHACGALFSLALDDDSKTAIGVLGALPPLIHLLRSDCERTRHESALALYHLSLVQSNQTKLTKLGSVPLLMDMVKSYHMTSRILLILGNLAAGVDGPSALLDASAVEHLVGLLDEKEPVSGSTCESCVAVLYALSRGGLRFKALAMAARAVEVLRKVEKVGSERIMVPENRTL* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00237 227 Gene3D - 136 220 IPR011989 -
Pte6g00237 227 Gene3D - 4 135 IPR011989 -
Pte6g00237 227 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 78 120 IPR000225 GO:0005515
Pte6g00237 227 Pfam Armadillo/beta-catenin-like repeat 68 106 IPR000225 GO:0005515
Pte6g00237 227 Pfam Armadillo/beta-catenin-like repeat 28 65 IPR000225 GO:0005515
Pte6g00237 227 SUPERFAMILY ARM repeat 18 202 IPR016024 -
Pte6g00237 227 PANTHER U BOX DOMAIN-CONTAINING 18 211 - -
Pte6g00237 227 SMART arm_5 67 107 IPR000225 GO:0005515
Pte6g00237 227 SMART arm_5 26 66 IPR000225 GO:0005515
Pte6g00237 227 SMART arm_5 108 146 IPR000225 GO:0005515
Pte6g00237 227 SMART arm_5 147 190 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00237 Pte-Chr6 2573687 2574908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00237 8 227 U-box Gene Family AT5G40140 58.824 2.30e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00237 - - qsa:O6P43_004571 286.574