Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00221 ATGGGCAAAGCTACAAGGTGGCTGAAGGGGTTGTTGGGAATGAGGAAAGAGAAGGAAAAGGAAAACATGGACAATTCCAGCTGTGGCAGCAATGAAAAGAGGGAGAAGAAAAGATGGAGTTTTGCCAAGTTAGCTAAAGATTCAGACTCAGTTGGTAATGCTCCAGCAAATATTGAGGCTGCTATTTCAGCCTCCCACACTGCTTGGATTAGATCCTATATTGTTGACACAGAAGAAGAGCAGAAAAAGCATGCCATTGCAGTGGCTGCAGCTACAGCTGCTGCCGCTGATGCTGCAGTGGCAGCAGCACAAGCTGCTGTTGCTGTTGTGAGACTAACAAATCAAGGCAGAGAGCCTCGTCTGTTAAGTGAGGCAAGAGAGAGGTCGGCTGCAGTCAAGATTCAAACTGTGTTTAGAGGATTTTTGGCAAGGAAAGCACTTCGCGCATTGAAAGCACTTGTGAAATTGCAAGCCCTTGTGAGAGGCTATTTGGTTAGAAAGCAGACTACTGCAACTTTCTACAGCATGCAAGCACTAATCAGAGCTCAGACTGCTCTCCGAACTCAACGTGCTCGTCGATCATCAAGTAAAGAGAACAGACACTACCCTGAAAATCGTCCTAGGAAATCTATTGAAAGGTTTGATGAAAGCAGAAGTGAATCCCACAGCAAAAGGCTCAGTACTGCATGCCACGAAGTTCCCTTGAATATTTTAGATGAGAGCCCCAAGATTGTTGAAATTGACACATACATGACAGGATCAAGGTCTAGGCGGATTTGCTACAGCAGCACATTGTCTGAATATGGTGAAGATGAATCAGATCAAGCACTGTCATCTCCGATTCCTTGTTCGATACCCGGGCACTTTTCGGTACCGGATTCTAAGCAGTTTCAAGATCATGACTGGTACTATTTCAATGCAGATGACTGTAAATTTCCTACTGCTCAAAGCACTCCTCGTTTTGCCAACATTGTGAGGCCTAATAGCCCTTCTACACCAGCGAAGAGTGTGTGTGGAGACAGCTTTTTCCGGCCTTATTACTCTAATGTCCCCAATTACATGACTAATACACAATCCTTCAGAGCAAAGTTGAGGTCTCACAGTGCACCAAGGCAAAGATCAGAGCTCGGTCCTAAGAAGTTGTCTCTTAATGAAGTAATGGCAGCAAGAAACAGCATAAGTAGTGTCAGAATGCATCGTCCTTCGTACACATATGTTCGAGAGTCCTGTAATTTTTAA 1239 0.4471 MGKATRWLKGLLGMRKEKEKENMDNSSCGSNEKREKKRWSFAKLAKDSDSVGNAPANIEAAISASHTAWIRSYIVDTEEEQKKHAIAVAAATAAAADAAVAAAQAAVAVVRLTNQGREPRLLSEARERSAAVKIQTVFRGFLARKALRALKALVKLQALVRGYLVRKQTTATFYSMQALIRAQTALRTQRARRSSSKENRHYPENRPRKSIERFDESRSESHSKRLSTACHEVPLNILDESPKIVEIDTYMTGSRSRRICYSSTLSEYGEDESDQALSSPIPCSIPGHFSVPDSKQFQDHDWYYFNADDCKFPTAQSTPRFANIVRPNSPSTPAKSVCGDSFFRPYYSNVPNYMTNTQSFRAKLRSHSAPRQRSELGPKKLSLNEVMAARNSISSVRMHRPSYTYVRESCNF* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00221 412 MobiDBLite consensus disorder prediction 15 35 - -
Pte6g00221 412 Pfam Protein of unknown function (DUF4005) 329 395 IPR025064 -
Pte6g00221 412 ProSiteProfiles IQ motif profile. 127 155 IPR000048 GO:0005515
Pte6g00221 412 MobiDBLite consensus disorder prediction 187 226 - -
Pte6g00221 412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 170 IPR027417 -
Pte6g00221 412 MobiDBLite consensus disorder prediction 191 226 - -
Pte6g00221 412 PANTHER IQ-DOMAIN 5-RELATED 1 382 - -
Pte6g00221 412 Pfam IQ calmodulin-binding motif 128 148 IPR000048 GO:0005515
Pte6g00221 412 Pfam IQ calmodulin-binding motif 151 168 IPR000048 GO:0005515
Pte6g00221 412 Gene3D - 124 174 - -
Pte6g00221 412 SMART iq_5 149 170 IPR000048 GO:0005515
Pte6g00221 412 SMART iq_5 126 148 IPR000048 GO:0005515
Pte6g00221 412 ProSiteProfiles IQ motif profile. 151 178 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00221 Pte-Chr6 2419184 2420912 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00221 1 398 IQD Protein Family AT3G16490 50.980 1.07e-99 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00221 - - gmx:100797686 447.203