Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00220 ATGCACGCTATTGAAATCTTGGCTTTGGACAAACACAAATTTTGGTCCGTTAGGATTGAGCTTCGTCAGTATATTTACAAGAATACCCACGATCTAGTTGCAAGAATTCACCGATATAATAGTCTCGGTCAAGCTTCCTGCATTTCTCTATCACCTCAAAAATGTCTACACGATCACAATGGCCTCTTCTCTCTCGATCCAACTGAAGCCGACGCCACAGATTTCATCCGTACAAACTGTGGCACAACTCTCTACCCCAACCTTTGCTACACCTCTCTCTCTCGCTACGCCAGTGCGATCCAGCAAAGCCTTGGTCAGCTTGCACGGGTTGCCGTTGGAGTCAGCCTACTCAAAGCTCGTCATATTGCTAAATATATATCAGAACTAACTCGTGAAGATGACTCCGGACTCGACTCCAGGTCTGTCTCTGCCCTCCATGACTGCTTCAGCAACCTGGGTGATGCAGTAGATGAAATACGTGGCTCATTGAAACAGATGCGCCAGCTGGGTGCCGTTGGAACTGGGATCGAGTCGTTCAGATTTCATATGAGTAATGTGCAGACATGGATGAGTGCTGCTTTGACAGATGAAGAAACTTGCACGGACGGGTTTCAGAATGTGCCTGATGGACCTGTGAAGAATGATGTTTGCGAAGGAGTCACTGATATGAAGAAGTTCACAAGCAATGCTTTAGCTCTGGTGAATACTTTTGCTGCTAACAATAATGGGATTCCATAG 738 0.4621 MHAIEILALDKHKFWSVRIELRQYIYKNTHDLVARIHRYNSLGQASCISLSPQKCLHDHNGLFSLDPTEADATDFIRTNCGTTLYPNLCYTSLSRYASAIQQSLGQLARVAVGVSLLKARHIAKYISELTREDDSGLDSRSVSALHDCFSNLGDAVDEIRGSLKQMRQLGAVGTGIESFRFHMSNVQTWMSAALTDEETCTDGFQNVPDGPVKNDVCEGVTDMKKFTSNALALVNTFAANNNGIP* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00220 245 CDD PMEI-like_3 80 239 - -
Pte6g00220 245 Gene3D Invertase/pectin methylesterase inhibitor family protein 71 237 IPR035513 -
Pte6g00220 245 NCBIfam pectinesterase inhibitor domain 69 236 IPR006501 GO:0004857
Pte6g00220 245 FunFam Pectin methylesterase inhibitor 1 71 237 - -
Pte6g00220 245 SMART PMEI_2 71 233 IPR006501 GO:0004857
Pte6g00220 245 PANTHER PECTINESTERASE INHIBITOR-LIKE 62 233 - -
Pte6g00220 245 Pfam Plant invertase/pectin methylesterase inhibitor 74 233 IPR006501 GO:0004857
Pte6g00220 245 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 74 237 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00220 Pte-Chr6 2414821 2415966 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00220 67 245 Carbohydrate Esterase AT5G53370 30.387 8.00e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00220 - - qsa:O6P43_032527 266.159