Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00208 ATGCCGGTACTGCGTGTTGGAGTGCGCAGGGGCCGGACAGCAGCGAAGCAGGAGATAGAACAGGAGAAGCCAGGTGTACAGCCGAATCCAATTGGAGAAGGTGAGGCTATTGCAACGAGAACAAGGAGGAGGAAGGCGGCGGCGGCGGCGGCGGCCGGAGGAGAAGCAGTTGTGACAAAGCCGACAGTAGAAGCAGTGGTAGCGCCTAAGACGAAGAAGAGAAAGCAGGAGAAGAATAATAAGGTCGGGGTAAATGAAAAGGTAGCTCTACCAGCGGGAAAGAAGGAGGAAGAGAAGAAAGGATTAGAAGCACAGAAGCAGAAGGTTGACGTTGGTATTGCTGGCGAGGCTGGAAAAGAAGGGATTGGTGAGAAACAGATGGATGACTTTAATAGTGGCGGTAAGAGTGACAAGGGTAATGCTGGTGACGATGAAGGGACTACTGCTCCACTTCCAGAAAAGGTGCAATTAGGAAATTCCCCTGTCTATAGATTGGATAGGAAGTTGGGCAAGGGTGGATTTGGACAAGTGTATGTTGGCAGACGTTTGTCTACTGCAAATGCCAATGAGAGAACTGGTCCAGGGGCTGTCGAGGTTGCATTGAAATTTGAGCATGTAAATAGCAAAGGGTGTAGTTATGGGCCACCGTATGAGTGGCAGGTGTACAGTGTTCTTGGCGGTAGCCATGGTGTGCCACGAGTACACTACAAGGGTCGACAAGGCGATTATTATGTTATGGTTATGGATATGCTGGGTCCCAGTCTATGGGATGTTTGGAACAACAATTCTCACACCATGTCTGTTGAAATGGTTGCTTGTATTGCTGTTGAAGCTATATCCATATTGGAGAAGATGCATTCACGAGGGTATGTGCATGGAGATGTGAAGCCGGAAAATTTTCTGCTTGGTCCTCCAGGGACACCTGATGAGAAAAAACTATTTCTAGTTGATCTTGGTTTAGCTACTAGATGGCGAGATGGCAGTACAGGCTTGCATGTTGAATACGACCAAAGGCCAGATGTTTTCAGGGGCACAGTTCGTTATGCCAGTGTACATGCACATCTAGGGAGAACTGGAAGTAGAAGAGATGATCTAGAGTCTCTTGCTTACACACTTATTTTCCTTCTTCGAGGTCGTTTGCCTTGGCAAGGCTACCAGGGAGAGAATAAAGGCTTTCTTGTTTGCAAGAAAAAGATGGGCACTTCTCCGGAGACACTTTGTTGCTTCTGCCCACAGCCTTTTAGACAGTTTGTTGAATATGTGGTGAACTTAAAGTTTGACGAAGAACCTAGTTATGCAAAATATATTTCATTATTTGATGGCATTATTGGTCCCAATCCAGATATTAGGCCAATAAACACGGATGGTGCACAAAAGCTCATTGGTCACAAGAGAGGTCGTTTGGCCATGGAAGAGGACGAAGATGACGGTCAACCAAAGAAGAAAATACGTATGGGTATGCCTGCGACACAATGGATCAGTATTTACAATGCTCGTCGTCCAATGAAGCAAAGGTATCACTACAATGTGGCAGATGCGAGACTAGCCCAACACATTGAAAAAGGCAATGAGGATGGTTTGTTTATCAGCAGTGTAGCTTCCTGCCAAAACCTGTGGGCCTTAATAATGGATGCAGGAACTGGTTTTACATCTCAAGTTTATGAACTTTCCCCCGTTTTTCTCCACAAGGAATGGATAGTGGAGCGATGGGAAAAGAACTATTATATTAGTTCGATAGCTGGAGCTGCAAATGGAAGCTCACTTGTTGTGATGTCTAGGGGAACACCATTTTCACAGCAATCGTACAAAGTAAGTGAATCGTTTCCATTCAAATGGATTAACAAAAAATGGAGGGAGGGGTTCTTCGTAACAGCAATGGCCACTGCAGGGAGTAGGTGGGGAGTAGTAATGTCTCGTGGGGCAGGATTTTCTGACCAGGTGGTTGAACTAGATTTTCTTTATCCTAGTGAAGGTATACATAAGCGATGGGACTGTGGTTACCGTATCACAGCAACTGCAGCAAATTGGGACCAGGCAGCTTTTGTGCTGAGTGTCCCGAAGAAGAGACCTGCTGATGAAACGCAGGAAACACTTAGGACCTCAGTTTTCCCAAGCACGCATGTAAAGAAGTGGGGAATGGTAGAAGAGGCTCAAAAGAAACCTCCGATAGAAGAAGATAGAGCTCTCCATTTCACCGCAGTAAAGTGA 2208 0.4611 MPVLRVGVRRGRTAAKQEIEQEKPGVQPNPIGEGEAIATRTRRRKAAAAAAAGGEAVVTKPTVEAVVAPKTKKRKQEKNNKVGVNEKVALPAGKKEEEKKGLEAQKQKVDVGIAGEAGKEGIGEKQMDDFNSGGKSDKGNAGDDEGTTAPLPEKVQLGNSPVYRLDRKLGKGGFGQVYVGRRLSTANANERTGPGAVEVALKFEHVNSKGCSYGPPYEWQVYSVLGGSHGVPRVHYKGRQGDYYVMVMDMLGPSLWDVWNNNSHTMSVEMVACIAVEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDGSTGLHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPETLCCFCPQPFRQFVEYVVNLKFDEEPSYAKYISLFDGIIGPNPDIRPINTDGAQKLIGHKRGRLAMEEDEDDGQPKKKIRMGMPATQWISIYNARRPMKQRYHYNVADARLAQHIEKGNEDGLFISSVASCQNLWALIMDAGTGFTSQVYELSPVFLHKEWIVERWEKNYYISSIAGAANGSSLVVMSRGTPFSQQSYKVSESFPFKWINKKWREGFFVTAMATAGSRWGVVMSRGAGFSDQVVELDFLYPSEGIHKRWDCGYRITATAANWDQAAFVLSVPKKRPADETQETLRTSVFPSTHVKKWGMVEEAQKKPPIEEDRALHFTAVK* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00208 735 MobiDBLite consensus disorder prediction 90 106 - -
Pte6g00208 735 ProSitePatterns Protein kinases ATP-binding region signature. 169 202 IPR017441 GO:0005524
Pte6g00208 735 PANTHER CASEIN KINASE-RELATED 156 694 - -
Pte6g00208 735 MobiDBLite consensus disorder prediction 1 33 - -
Pte6g00208 735 SMART serkin_6 163 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00208 735 MobiDBLite consensus disorder prediction 69 157 - -
Pte6g00208 735 SUPERFAMILY Protein kinase-like (PK-like) 163 446 IPR011009 -
Pte6g00208 735 Pfam Protein kinase domain 163 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00208 735 FunFam casein kinase 1-like protein HD16 136 484 - -
Pte6g00208 735 ProSiteProfiles Protein kinase domain profile. 163 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00208 735 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Pte6g00208 735 MobiDBLite consensus disorder prediction 121 142 - -
Pte6g00208 735 Gene3D Transferase(Phosphotransferase) domain 1 129 483 - -
Pte6g00208 735 CDD STKc_CK1 163 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00208 Pte-Chr6 2308302 2315388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00208 120 388 AGC Kinase Gene Family AT3G08730 23.247 5.09e-09 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Pte6g00208 Pkinase 3.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00208 - - qsa:O6P43_018208 1135.55