Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00193 ATGATGGCTGGAAACCATAATTGGTTGAATGTTCATCCACCATCCATGATCTCTCCTCAGTTTGTGCTTGGATCTCCTTCAGTTTCTTTGAATTCTTTAACAGACAGCCAAGAAACTATACAGTCATGGAGCCAAATGCTTATGACTGGATTACCGTTTGAAGAAGATAGGACAGGTCTAACTCATTTTCAAACAAAAAAGTTGGAAAATTGGGATGACCAAATTCTTAATCCAGCCGCCGCAAGAGTTCCATTTCTTGATGTCATAAAGCAAGAAGTTTCTCACTGTAATGTTTTGTACGGCCATGGACATGAGGAATTCCAAGGATCTGGACCTGTATGGTCAAACTCACGTATCGTGCCAATTTCTTCTCCTAGGTCTTGTATCACTAGCTTAAGTAATAACATGTTGGATTTCACTTACAACAACGCAGACAGGAGGAACCAACTACCAGATCATGCATCTGAGCGTGACAGCACAGCCCATGCCGCCATCTGCAAGAAAGCTAGGGTTCAACCCTCTTCTAGCCAACCACCCCTTAAGGTACGAAAGGAGAAACTAGGTGATAGAATAACGGCCCTACACCAGCTTGTATCCCCATTTGGAAAGACTGACACCGCTTCTGTACTGTTAGAAGCCATTGGATACATCAGATTCCTTCAGGGTCAAATTGAGGCGCTCAGTTCTCCTTACTTGGGCAGTGCATCAAAAAACATAAGGAACCGACAGTCTGTAAGTAAATACACACACACACATATATATATATATATATGCAACTACGCAAGTACCGTACCATACATCTCATTTAGCATGTCTCACGGCTCTTTTCCCAGTCCTTGCAAAAACAGACATCACATGCTCAGTACGCACTTGTTTAAGCAGGCATGGGGCAACCTATATAATTTTTGCAACAATAATTGTTTATATTATGTGAATGATGAAAGGATCTCTTTTCTCTTTTTTTTTCCAGGCCAATGGTGA 981 0.4159 MMAGNHNWLNVHPPSMISPQFVLGSPSVSLNSLTDSQETIQSWSQMLMTGLPFEEDRTGLTHFQTKKLENWDDQILNPAAARVPFLDVIKQEVSHCNVLYGHGHEEFQGSGPVWSNSRIVPISSPRSCITSLSNNMLDFTYNNADRRNQLPDHASERDSTAHAAICKKARVQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGSASKNIRNRQSVSKYTHTHIYIYICNYASTVPYISFSMSHGSFPSPCKNRHHMLSTHLFKQAWGNLYNFCNNNCLYYVNDERISFLFFFPGQW* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00193 326 FunFam Transcription factor bHLH123 family 181 244 - -
Pte6g00193 326 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 53 235 - -
Pte6g00193 326 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 232 IPR036638 GO:0046983
Pte6g00193 326 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 171 220 IPR011598 GO:0046983
Pte6g00193 326 CDD bHLH_AtbHLH_like 181 228 IPR045239 -
Pte6g00193 326 Gene3D - 181 244 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00193 Pte-Chr6 2042119 2045505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00193 63 245 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 46.445 2.99e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00193 - - gmx:100802121 318.546