Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00187 ATGGAGGTAGTCAAGGAAGTTGCTAAGCAGGGTACCTCATCTGATGATACGGTTGCTATCAGAGCGGACCAGAAGAGTTATAGTTACTTACAACTCATTTCATCTGCTCTGGGGATATCTTCCCTATTGTCTAATTCAGACTTAAAGGCGACTACATCAATTGATGGCATCAAAGGCTATAAATCCCTCAAAGGAGCTCGAATAGGAATATTGGCAAAACCCTCTGCAGAATTTGTTGCTGGGATATTGGGGACGTGGTTTAGTGGAGGAGTTGCAGTGCCTCTGGCACTCAGCTATCCAGAAGCTGAGCTCTTATACGTCATAAACAATTCGGATGTCTCCATGATATTGAGTACTGAAGATCACAATGAAGTAATGCAAAATGTTGCCAGTAAAAGTGGCATCCGTTTATCCCTTATTCCTGCAGTTCCCCACAAGTCTTTGGAGGAAGGCAGCTGTGCAGGAAATGGTGAAATGGATGCAGATAAAATCTTGCAGCGAAATTTTGAAATGTCAAGTGAGGAGCCTGCATTGATTTTGTATACTAGTGGTACGACGGGTAAGCCCAAGGGAGTTGTTCATACACACAGAAGCATCTGTGCGCAGGTCCAAACATTGACAAAAGCATGGGATTACACATCTGCTGATCAATTTCTCCACTGTCTGCCCCTACATCATATCCAAACTCTAATTTATGAATATATTACAAATATTTATTTGCATGTTGAATTTATGCCAAAATTTAGTGTGAGGGGAATATGGCAGAGATGGCGTGAATCATATCCTCCTGAGGGAAACAAATGTGACGCTATTACTGTCTTCACAGGGGTTCCAACAATGTATACTCGATTGATTCAAGGTTATGAAGCAATGGATCCAGAGCAACAAACTCTTTCGGCATCTGCTGCAAGGAAGTTGCGACTTATGATGTGTGGGTCCTCTGCACTCCCTCAACCTGTTATGCAAGAGTGGGAAAGCATCACTGGGCATAGGCTGTTGGAGAGATATGGCATGACAGAATTTGTCATGGCAATATCAAATCCCTTAGAAGGTGCTCGCAAAGCAGGAACTGTAGGGAAGCCATTTCCTGGTGTTGAGGTTAACATTCTCGTAGACGATGAGAGTGCAGATGTCAATAAAGTGGGCGAGCTTTGTGTTAAAAGCCCTTCTTTGTTCAAAGAATATTGGAAACTTCCAGAGGTAACTAGAGACTCCTTTACCAATGATGGCTTTTTCAGGACCGGAGATGCTGTCACTACAGATGAAGATGGATATTACATCATTCTCGGGCGTACTAATGCTGATATCATGAAGGTTGGTGGCTACAAGTTATCTGCCCTAGAAATTGAATCTGTGCTATTAGAGGCAAGTACTAATCCAGCTATTTCCGAATGCTGTGTCCTAGGCTTACCAGACAAAGATTATGGGGAGTCCATATGTGCAATTGTCGTGCTTGAGCCGCATGCTAAAGGGGATGAAGATAAAGATTCGAAACCTGCATTCAGCTTGGAAGGATTACGTTCTTGGGCTAAAGACAGACTTGCACCATACAAGATACCTAATCGGTTGTTCTTGTGGGACTCTCTACCTCGTAATGCCATGGGAAAGGTGAACAATCCTTTTTAA 1626 0.4305 MEVVKEVAKQGTSSDDTVAIRADQKSYSYLQLISSALGISSLLSNSDLKATTSIDGIKGYKSLKGARIGILAKPSAEFVAGILGTWFSGGVAVPLALSYPEAELLYVINNSDVSMILSTEDHNEVMQNVASKSGIRLSLIPAVPHKSLEEGSCAGNGEMDADKILQRNFEMSSEEPALILYTSGTTGKPKGVVHTHRSICAQVQTLTKAWDYTSADQFLHCLPLHHIQTLIYEYITNIYLHVEFMPKFSVRGIWQRWRESYPPEGNKCDAITVFTGVPTMYTRLIQGYEAMDPEQQTLSASAARKLRLMMCGSSALPQPVMQEWESITGHRLLERYGMTEFVMAISNPLEGARKAGTVGKPFPGVEVNILVDDESADVNKVGELCVKSPSLFKEYWKLPEVTRDSFTNDGFFRTGDAVTTDEDGYYIILGRTNADIMKVGGYKLSALEIESVLLEASTNPAISECCVLGLPDKDYGESICAIVVLEPHAKGDEDKDSKPAFSLEGLRSWAKDRLAPYKIPNRLFLWDSLPRNAMGKVNNPF* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00187 541 Pfam AMP-binding enzyme 64 438 IPR000873 -
Pte6g00187 541 SUPERFAMILY Acetyl-CoA synthetase-like 13 538 - -
Pte6g00187 541 Pfam AMP-binding enzyme C-terminal domain 448 536 IPR025110 -
Pte6g00187 541 ProSitePatterns Putative AMP-binding domain signature. 179 190 IPR020845 -
Pte6g00187 541 Gene3D - 5 431 IPR042099 -
Pte6g00187 541 CDD MCS 16 538 - -
Pte6g00187 541 Gene3D - 435 540 IPR045851 -
Pte6g00187 541 PANTHER ACYL-COA SYNTHETASE 27 538 - -
Pte6g00187 541 FunFam Acyl-CoA synthetase family member 3 9 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00187 Pte-Chr6 1913258 1918762 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00187 170 536 Monolignol Biosynthesis Gene Families AT1G20500 26.133 1.33e-28 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00187 K18660 - qsa:O6P43_018174 765.377