Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00167 ATGCGAGACCTCTTGTCTTTCGCCTCCCTTGTAGGTCGAAAAAACCATCTCTGTGTTGAAAGGTCTCCACTGTCCGACCAGACTACTGGGACTCTCTCGGAGCTTGTGATACTCAAGGAGAAAAAGTCTCTGACATCCTCAACTGAAACTGAAACAGAGTATACCTCAGTAACATGTACACCAAAGAGGAAAGTTCAGCTTAAGCTTGTGAGAATCATAATCATTAATGCTGATGCTACTGATTCTTCAAGTGATGAAGACGAAGAAGTCAAAAGAACTGTACGAAGAATGAAGAGACATGTAAAAGAAATCAACTTGGAGCTTCCTTCTTCAAACTCTGTTACTCATTCTTCCTCCACTTTAACTACTGGTTCTTCGGTTCAGCAGCAAAAGAAAAAGCCTAAGAGAACTTCAATGAGTTCTAGCAATGTAACACTCTCTCAGTGTCATAAGTTCAGAGGAGTCCAACAAAGACCGTGGGGAAGATGGGCTGCAGCCTGCAGAGGACAGGACAGTAAATGCATATACCAGTCATTATCGTTGCAATAA 549 0.4226 MRDLLSFASLVGRKNHLCVERSPLSDQTTGTLSELVILKEKKSLTSSTETETEYTSVTCTPKRKVQLKLVRIIIINADATDSSSDEDEEVKRTVRRMKRHVKEINLELPSSNSVTHSSSTLTTGSSVQQQKKKPKRTSMSSSNVTLSQCHKFRGVQQRPWGRWAAACRGQDSKCIYQSLSLQ* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00167 182 MobiDBLite consensus disorder prediction 105 145 - -
Pte6g00167 182 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 68 168 - -
Pte6g00167 182 MobiDBLite consensus disorder prediction 106 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00167 Pte-Chr6 1674180 1674918 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00167 68 168 AP2-EREBP Transcription Factor Family AT4G27950 41.584 2.31e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00167 K13434 - qsa:O6P43_020468 80.4925