Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00166 ATGAGTGTTGTTGGTTTTGATTTTGGCAACGAGAGCTGCCTAGTAGCTGTTGCAAGACAGAGGGGGATTGATGTTGTACTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTTTGCTTTGGAGACAAGCAGAGGTTCATTGGGACAGCTGGTGCTGCATCCTCCATGATGAACCCCAAGAACTCCATCTCCCAGATTAAGCGATTGATTGGTAGGCAGTTCAATGATCCAGAACTGCAGAGAGATCTCAAATCATTTCCTTTTGCTGTTACTGGAGGGCCTGATGGGTTTCCTTTGATTCACGCCCGTTACTTGGGGGAAGTAAGAACATTTACACCTACTCAAGTACTTGGAATGTTGCTGTCAGATCTCAAAGGGATAGCAGAGAAGAATTTAAATGCAGCAGTGGTGGATTGCTGCATCGGCATTCCAGTGTATTTTACTGATATGCAGAGAAGGGCTGTAATGGATGCTGCCACTATTGCTGGTTTGCACCCACTTCGTCTGCTACATGAGACAACTGCCACTGCCTTAGCCTATGGCATTTACAAGACTGACCTACCTGAGAATGATCAGCTGAATGTTGCTTTTGTAGACATTGGGCATGCTAGTATGCAAGTATGTGTAGCTGGGTTCAAGAAGGGCCAATTGAAAATTTTGTCTCATGCATTTGATAGGTCTCTTGGTGGAAGAGACTTCGACGAAGTTCTATTTCAGTACTTTGCTGCAAAGTTCAAGGATCAGTATAGAATTGATGTTTTCCAGAATGCCAGGGCTTGTATAAGGCTCAGGGCGGCATGTGAAAAACTGAAAAAGGTGCTCAGTGCAAATCCTGAGGCACCTTTGAATATTGAGTGCTTAATGGACGAGAAGGATGTCAGTGGATTTATCAAGCGGGATGAGTTTGAAGAGATTAGTGTACCCATCTTGGAGCGGGTCAAAAAACCTCTAGAGAAGGCCCTTGCAGAAGCTGGTCTTACAGTTGAGAATATTCACATGGTTGAGGTGGTTGGTTCAGCATCCCGTATCCCTGCTATAGTTAAGATTTTAACTGACTTCTTCAAAAAGGAGCCTAGGCGAACGATGAATGCTAGCGAGTGTGTTGCCAGGGGTTGTGCCCTGGAGTGTGCAATACTGAGCCCAACGTTTAAAGTTAGGGAGTTTCAGGTCAATGAGAGCTACCCTTTCTCAATTTCTTTGTCCTGGAAAGGTTCAGCTCCAGAAGCTCAGATTGATACATTTGGAAGTGCGCATAGTACCATTGTTTTCCCAAAGGGAAATCAAATTCCAAGCATTAAGGCATTGACATTCTACAGGCCCAGTACATTCTCTGTTGACGTGCAATACACTGACGAGAGTGAGTTGCAGACACATGCAAAGATTAGTACTTGCACTATTGGTCCGTTCCAATCTACAAAAGGAGACAAGGCCAAAGTGAAAGTGAAAGTTCGTCTGAACATTCATGGAATTGTTTCTGTTGAATCAGCTACTCTGCTGGAGGAGGAAGAAGTTGATGTTCCTGTTACGAAAGAGCCAGAAGAAGAAAGTACAAAGATGGATACTGATGATTCTTCTACAGCTCCTGTTAATACTTCTCCTCCAAACTCAAATGAAACTGATGTGAACATGGACGATGCAAAGGGAAATGTGGATAACCAAGTGGCTGAAAATGGTGTCTCTGATTCTGTAGACAAGACTGCACAAATGGATACCGATAAAAAGGCTGAAACTGCCAAGAGAAAAGTGAAGAAAACTAGCATACCTGTCTGTGAGGTCGTCTATGGAGCACTTGCACATGCAGACTTGCAAAAAGCTGTGGAGAAGGAGTTTGAGATGGCACTGCAAGATCGGGTGATGGAGGAAACTAAAGACAAGAAAAATGCTGTCGAGGCATATGTCTACGACATGCGAAATAAGCTTGGTGACAAATATCAAGATTTCGTTACTGATTCAGAGAGAGAGGAGTTTATGGCTAAACTTCAGGAGGTGGAAGATTGGCTGTATGAAGATGGTGAGGATGAGACAAAAGGTGTCTACATTGCCAAACTCGAGGAGCTTACAAAGCAAGGCAATCCCATTGAAGAGCGTTACAAGGAACATGTCGAGAGGGGCTCAGTGGTTGATCAGCTCGGGTATTGCATTAATAGTTACAGGGAAGCTGCTATGTCTAGTGATCCCAAATTTGATCACATTGATGTCTCTGAAAAACAAAAGGTTCTGAATGAATGTGTTGGAGCGGAGGCCTGGATTAGGGAGAAAAAACAGCAGCAGGACTCTCTTCCAAAATATGCGAACCCAGTCCTTCTGTCAGCTGATGTGAGAAGGAAGGCTGAGGCGCTTGATAGGTTCTGTAAACCAATCATGACGAAACCTAGACCAGCCAAGGCAGCGGCCCCAGAAACACAAACAGCAACTGCACCTCAAGGGGGGGAACAGCAGCATCCCCAGGGACAGGAAGCCAATCCTAACGGGCAACATGGCGCTGGTGAGCAGAACGGGGAAGGTAATGTCGAGGCACCAGCCGCTTCAGCAGAACCGATGGATACTGAGAAGGGAGAAACTGCCAGCACCTTATGA 2580 0.4519 MSVVGFDFGNESCLVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASSMMNPKNSISQIKRLIGRQFNDPELQRDLKSFPFAVTGGPDGFPLIHARYLGEVRTFTPTQVLGMLLSDLKGIAEKNLNAAVVDCCIGIPVYFTDMQRRAVMDAATIAGLHPLRLLHETTATALAYGIYKTDLPENDQLNVAFVDIGHASMQVCVAGFKKGQLKILSHAFDRSLGGRDFDEVLFQYFAAKFKDQYRIDVFQNARACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVSGFIKRDEFEEISVPILERVKKPLEKALAEAGLTVENIHMVEVVGSASRIPAIVKILTDFFKKEPRRTMNASECVARGCALECAILSPTFKVREFQVNESYPFSISLSWKGSAPEAQIDTFGSAHSTIVFPKGNQIPSIKALTFYRPSTFSVDVQYTDESELQTHAKISTCTIGPFQSTKGDKAKVKVKVRLNIHGIVSVESATLLEEEEVDVPVTKEPEEESTKMDTDDSSTAPVNTSPPNSNETDVNMDDAKGNVDNQVAENGVSDSVDKTAQMDTDKKAETAKRKVKKTSIPVCEVVYGALAHADLQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLGDKYQDFVTDSEREEFMAKLQEVEDWLYEDGEDETKGVYIAKLEELTKQGNPIEERYKEHVERGSVVDQLGYCINSYREAAMSSDPKFDHIDVSEKQKVLNECVGAEAWIREKKQQQDSLPKYANPVLLSADVRRKAEALDRFCKPIMTKPRPAKAAAPETQTATAPQGGEQQHPQGQEANPNGQHGAGEQNGEGNVEAPAASAEPMDTEKGETASTL* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00166 859 MobiDBLite consensus disorder prediction 802 831 - -
Pte6g00166 859 PRINTS 70kDa heat shock protein signature 332 348 - -
Pte6g00166 859 PRINTS 70kDa heat shock protein signature 140 160 - -
Pte6g00166 859 PRINTS 70kDa heat shock protein signature 2 15 - -
Pte6g00166 859 PRINTS 70kDa heat shock protein signature 363 383 - -
Pte6g00166 859 PRINTS 70kDa heat shock protein signature 30 42 - -
Pte6g00166 859 FunFam Heat shock 70 kDa protein 4 112 204 - -
Pte6g00166 859 FunFam Heat shock 70 kDa protein 4 598 708 - -
Pte6g00166 859 Gene3D - 38 113 - -
Pte6g00166 859 MobiDBLite consensus disorder prediction 785 859 - -
Pte6g00166 859 FunFam Heat shock 70 kDa protein 4 38 113 - -
Pte6g00166 859 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Pte6g00166 859 Gene3D - 5 374 - -
Pte6g00166 859 CDD HSPA4_like_NDB 2 381 - -
Pte6g00166 859 FunFam Heat shock 70 kDa protein 4 1 76 - -
Pte6g00166 859 Gene3D - 598 708 IPR029048 -
Pte6g00166 859 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 385 526 IPR029047 -
Pte6g00166 859 Gene3D Actin; Chain A, domain 4 230 313 - -
Pte6g00166 859 Gene3D - 186 360 - -
Pte6g00166 859 PANTHER HSC70CB, ISOFORM G-RELATED 1 850 - -
Pte6g00166 859 Pfam Hsp70 protein 3 587 IPR013126 GO:0005524|GO:0140662
Pte6g00166 859 MobiDBLite consensus disorder prediction 503 581 - -
Pte6g00166 859 MobiDBLite consensus disorder prediction 567 581 - -
Pte6g00166 859 MobiDBLite consensus disorder prediction 523 544 - -
Pte6g00166 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 599 698 IPR029048 -
Pte6g00166 859 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 710 797 IPR029048 -
Pte6g00166 859 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Pte6g00166 859 FunFam Heat shock 70 kDa protein 4 230 313 - -
Pte6g00166 859 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 631 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00166 Pte-Chr6 1667014 1672195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00166 4 438 Calmodulin-binding Proteins AT1G16030 34.475 4.13e-84 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00166 K09489 - qsa:O6P43_018124 1368.21