Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00162 ATGGGTGAGACTGAGGATGATACAGGGTATTCTCCTAATACAAATGGCGTTCATCATCAGCAGGGTTTTAGTTCTATGAATCATCAGAGACATTCGCTTAGGAGTGCACCAAATTCGTGTCAAGTTGGAAATAAATTTATTAAAGAGGATGATGAGTTTGAAGAAGATGTGGAAGGCTTCCAAGAGGAAGACGATGATGGAGATGCTGGTATTGAAAATGAAGATGGAGACAACAAGCAGAAAAGTGATCCTGTTAAGGCAGAGGATGTGGACATAGACAGCCGTAAAAAAAGGAGGTTGAGGACTTTGGGTTTGAGATATGAAATTGTTCCACGTGTTCCAGTGCAATCTCTAGCACCCCCTTCAGCTCCTAAAACATCTTTTGGTGGTAGGAATTCCCTTACAGATTGGACTGAACATGGTACAATGGCTCTTCTTGATGCTTGGGGTGACCAATTTCTTCAGAAAGGAAGGAAGAGTCTGCGGTCAGAGGAATGGCAAGAGGTAGCAGAGAAGATATCAGAAGTTTCTAATATTGAAAGAACAGATACCCAATGCAGGAATCGTGTTGATATGTTAAAGAAGAAATACAAGGAGAAGCTTAAATTAGCAGAAGTGACGGGTGAAACTTGTAAGTGGGTTTACTTTAAGAAAATGGATAAATTGCTGTCAGCATTCCCACAACAAGCTAGTCTCTCATGTACTTTAGATCCTGGGGAATATATTTTTATGACTTCTAAAGGACCGTTTAACTGTGCAAATGGGTTAGATGCAATGTGCTATACTCCTGAGAATTCAGGGTCCACAGGTTTCAGGATGATTCAGAAGAACTTCCACCAAAGAAAAGGAGGTATGGAGGGATAA 864 0.4086 MGETEDDTGYSPNTNGVHHQQGFSSMNHQRHSLRSAPNSCQVGNKFIKEDDEFEEDVEGFQEEDDDGDAGIENEDGDNKQKSDPVKAEDVDIDSRKKRRLRTLGLRYEIVPRVPVQSLAPPSAPKTSFGGRNSLTDWTEHGTMALLDAWGDQFLQKGRKSLRSEEWQEVAEKISEVSNIERTDTQCRNRVDMLKKKYKEKLKLAEVTGETCKWVYFKKMDKLLSAFPQQASLSCTLDPGEYIFMTSKGPFNCANGLDAMCYTPENSGSTGFRMIQKNFHQRKGGMEG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00162 287 Gene3D - 137 199 - -
Pte6g00162 287 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 125 249 IPR044823 -
Pte6g00162 287 MobiDBLite consensus disorder prediction 7 42 - -
Pte6g00162 287 MobiDBLite consensus disorder prediction 51 72 - -
Pte6g00162 287 MobiDBLite consensus disorder prediction 73 93 - -
Pte6g00162 287 MobiDBLite consensus disorder prediction 1 93 - -
Pte6g00162 287 Pfam Myb/SANT-like DNA-binding domain 136 222 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00162 Pte-Chr6 1649387 1650306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00162 126 225 Trihelix Transcription Factor Family AT3G14180 42.308 9.77e-21 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pte6g00162 Myb_DNA-bind_4 5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00162 - - qsu:112012058 275.789