Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00150 ATGAAGACAAAAAATATCATCACTTCTAGAGCTGCTTCTTTTTGCGCAAATGGTCAGTTGCCCGCTCTGAAGGTGTCAGCACAACCAAATTTGAAGCAGCCAACAGGAAACAACATGAAGAGACCAGCTTTTGATAATACACGTCTTCAACACAAGAGGAGAGCAGCTTTTGAAGATGTAACTAATATCTGTTGTGAAGCATCATATAAAACCTGTTTGAATGCAACCAAACTTCAGCTATCTCAAAGGCCAGATCCTCATTTTATGGAAACAATACAGCGAGACATCACCAAAAGCATGCGGGGAATACTTGTTGATTGGCTTGTAGAGGTTTCTGAGGAACACAAGTTGGTTCCAGATGTCCTTTACCTTACTGTATATCTCATTGATTGGTATCTCTCTCAAAATTACACTGAAAGACAGCGTCTTCAGCTACTTGGCATCACTTGCATGCTAATTTCTTCGAAGTATGAAGAGATTTGTGCCCCACGGGTTGAAGAATTTTGTTTCATCACAGACAATGCATACACAAAAGAAGAGGTACTGAAGATGGAAAGGGATGTACTTAAGTACCTTGGATTTCAGTTGTTTGCACCGAGTGCCAAGACTTTCCTGAGGAGGTTTCTCCAAGCTGCACAATTCTCTTACGAGCATCCTTGCCTTGAGTTGGGGTACCTGGCCAATTATCTAGCTGAGTTGACACTGACAAATTATGGATTCTTGAAATTTGTTCCTTCAATAATTGCTGCGTCAGCTGTATTTCTTGCCAGATGGACAATAGATCAGACAATACACCCATGGAATTCAACTCTTGAATACGATACCCGGTGCAAGGCATCATACTTTGAAAATCTCTGTACTTGCATTACAAGAATTACAGCTGAACACAAATGGCTGTAG 900 0.4089 MKTKNIITSRAASFCANGQLPALKVSAQPNLKQPTGNNMKRPAFDNTRLQHKRRAAFEDVTNICCEASYKTCLNATKLQLSQRPDPHFMETIQRDITKSMRGILVDWLVEVSEEHKLVPDVLYLTVYLIDWYLSQNYTERQRLQLLGITCMLISSKYEEICAPRVEEFCFITDNAYTKEEVLKMERDVLKYLGFQLFAPSAKTFLRRFLQAAQFSYEHPCLELGYLANYLAELTLTNYGFLKFVPSIIAASAVFLARWTIDQTIHPWNSTLEYDTRCKASYFENLCTCITRITAEHKWL* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00150 299 Gene3D - 84 197 - -
Pte6g00150 299 PANTHER CYCLINS 68 275 IPR039361 -
Pte6g00150 299 SUPERFAMILY Cyclin-like 199 292 IPR036915 -
Pte6g00150 299 Pfam Cyclin, N-terminal domain 76 196 IPR006671 -
Pte6g00150 299 Gene3D - 77 292 - -
Pte6g00150 299 SMART cyclin_7 106 190 IPR013763 -
Pte6g00150 299 SMART cyclin_7 203 294 IPR013763 -
Pte6g00150 299 SUPERFAMILY Cyclin-like 64 196 IPR036915 -
Pte6g00150 299 FunFam Mitotic cyclin 6 84 184 - -
Pte6g00150 299 Pfam Cyclin, C-terminal domain 199 291 IPR004367 -
Pte6g00150 299 FunFam Cyclin A1 186 298 - -
Pte6g00150 299 SMART Cyclin_C_2 199 297 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00150 Pte-Chr6 1509564 1515844 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00150 79 280 Core Cell Cycle Gene Families AT1G80370 70.297 1.54e-103 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00150 K06627 - tcc:18595851 333.183