Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00083 ATGGCTGACAACAAAGGCATTAGCTTAGAGGAAATCAAGAAGGAGAACATAGATCTCGAGCATATGCCACTTAATGAAGTATTTGAGCAGCTGCAATGTTCGAAAGAAGGTCTGACTAGTGAAGAAGGTCGGAAGAGACTGCAAATTTTTGGTCCAAATAAGCTAGAAGAGAAGAAGGCAAGTTGCAAATCATTTGAAAGCAAGGTTCTGAAGTTCTTGGGTTTCATGTGGAATCCTCTTTCATGGGTGATGGAGTTGGCTGCAATCATGGCCATTGCTTTGGCAAATGGAGGGAATAAGGGACCAGATTGGCAGGACTTTGTTGGCATAGTTGCATTGCTAATCATCAACTCAACGATAAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCAGCACTTATGGCCGGTCTGGCTCCAAAAACCAAGATTCTAAGAGATGGAAGATGGTGCGAGCAAGAAGCTGCTATATTGGTGCCTGGAGATATCATTAGCATTAAGTTAGGAGATATCATTCCAGCTGATGCTCGTCTTCTAGAAGGCGACCCTCTTAAAATCGATCAGTCTTCTCTTACAGGTGAGTCATTACCTGTTACAAGGTCCTCAGGAGATGAAGTCTTTTCTGGCTCCACAGTTAAACAAGGAGAGATTGAGGCTGTTGTGATTGCCACCGGAGTCCACACTTTCTTCGGTAAGGCAGCTCACTTGGTAGACAGCACCAACCAAGAAGGACATTTCCAAAAGGTAGTATTGACAGCAATTGGTAACTTCTGCATTTGCTCAATTGCAGTAGGCATGATTGTAGAGATCATAGTAATGTATCCAATTCAACACCGGAAGTATAGGGAAGGAATTGACAATCTCTTGGTGCTTCTCATTGGAGGAATCCCAATTGCCATGCCAACAGTTTTGTCTGTGACAATGGCTATAGGTTCTCACCGGCTGTCACAACAAGGTGCTATTACAAAGAGGATGACAGCCATTGAGGAGATGGCTGGAATGGATGTTCTATGCAGTGATAAAACAGGCACTCTCACATTGAATAAGCTTACTGTAGACAAGAACCTCATTGAGGTTTTCGCAAAGGACGTGGAGAAAGACATGGTTATATTGCTTGGAGCTAGGGCTTCCAGAGTTGAGAACCAAGATGCTATTGATGCTTGCATTGTTGGAATGCTCGGTGACCCTAGGGAGGCAAGAGAAGGTATCAATGAGGTACACTTCTTGCCCTTCAATCCTGTGGAGAAACGCACAGCCATAACATACATTGACTCTGAATCCAATTGGCACAGAGTTAGCAAAGGTGCTCCAGAACAGATAATAGAACTCTGCGATCTTCGCGAAGACTTAAAACAGAAAGTTCATGCTATCATTGACAAGTTTGCTGACCGCGGCTTACGTTCCCTTGCGGTAGCGAGACAAATGGTACCGGAAAAATCTAAAGAAAGTGCTGGATCACCATGGCAATTTGTCGGACTCTTGCCCCTCTTCGATCCTCCTAGGCATGATAGTGCTGAAACCATTAGCCGAGCACTTCATCTTGGAGTGAATGTGAAGATGATTACTGGTGACCAGCTTGCTATTGGGAAGGAGACTGGTCGAAGGCTTGGCATGGGAACGAACATGTATCCTTCTTCCTCTCTTCTTGGTCAGCACAAAGATGAGAGCATTGCCGCTCTTCCTGTCGATGAGCTGATTGAAAAAGCAGACGGCTTTGCTGGGGTGTTTCCTGAGCACAAGTATGAGATAGTAAAGAGACTGCAAGAAAGGAAGCATATATGTGGAATGACAGGAGATGGTGTGAATGATGCTCCTGCACTGAAAAGGGCAGACATAGGAATTGCAGTTGCGGATGCAACCGATGCAGCGAGGGGTGCATCTGACATAGTCCTAACAGAGCCGGGCCTAAGCGTGATAGTGAGTGCAGTTTTAACAAGTAGATCCATTTTCCAAAGGATGAAGAATTACACCATTTATGCTGTTTCTATAACAATCCGTATCGTCCTGGGATTTCTTCTGATTGCTCTCATATGGAAGTTTGATTTCTCGCCATTTATGGTTTTGATCATTGCCATACTCAATGATGGAACCATTATGACCATTTCTAAAGACAGAGTGAAGCCTTCACCTACACCAGATTCATGGAAATTAAGGGAGATATTTGCTACTGGCGTTGTCCTTGGAACCTACCTAGCTGTCATGACTGTTGTCTTCTTTTGGGCTGCTCATACATCTGACTTCTTCTCTAACAAGTTTGGTGTTAGATCTATAAGGAACAACTTGGCTGAGCTCACTTCAGCTGTGTATCTTCAAGTGAGTATTGTCAGTCAGGCTCTCATCTTTGTCACAAGGTCAAGGAGCTGGTCTTTAACTGAACGTCCTGGTCTCTTGCTTGTTACTGCATTTTTTATAGCACAATTGATTGCCACTATTATTGCTGTTTACGCTAACTGGGGCTTTGCAAGGGTACATGGGATTGGATGGGGTTGGGCAGGTGTCATTTGGCTCTACAGCTTTGTCTTCTACATCCCACTGGATATTCTCAAGTTTATAATCCGTTATGCATTGACTGGCAAAGCTTGGGATAACATCCTCCAGAACAAGACTGCTTTCACAACAAAGAAAGATTACGGAAAAGGAGAAAGAGAGGCACAATGGGCAACAGCTCAACGCACACTACATGGGCTTAACCCTCCTGAATCTGACACCCTGAGAGAAAAGAACTATAGGGAGTTGTCTGAAATTGCAGAGCAAGCCAAGAAGCGCGCTGAAGTTGCAAGGTTGAGGGAACTTCATACACTAAAGGGGCATGTTGAGTCAGTGGTGAAACTCAAAGGACTTGACATAGAGACCATCCAACAGCACTACACTGTTTGA 2880 0.4434 MADNKGISLEEIKKENIDLEHMPLNEVFEQLQCSKEGLTSEEGRKRLQIFGPNKLEEKKASCKSFESKVLKFLGFMWNPLSWVMELAAIMAIALANGGNKGPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMAGLAPKTKILRDGRWCEQEAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSSLTGESLPVTRSSGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQEGHFQKVVLTAIGNFCICSIAVGMIVEIIVMYPIQHRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFAKDVEKDMVILLGARASRVENQDAIDACIVGMLGDPREAREGINEVHFLPFNPVEKRTAITYIDSESNWHRVSKGAPEQIIELCDLREDLKQKVHAIIDKFADRGLRSLAVARQMVPEKSKESAGSPWQFVGLLPLFDPPRHDSAETISRALHLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQHKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRSIFQRMKNYTIYAVSITIRIVLGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLREIFATGVVLGTYLAVMTVVFFWAAHTSDFFSNKFGVRSIRNNLAELTSAVYLQVSIVSQALIFVTRSRSWSLTERPGLLLVTAFFIAQLIATIIAVYANWGFARVHGIGWGWAGVIWLYSFVFYIPLDILKFIIRYALTGKAWDNILQNKTAFTTKKDYGKGEREAQWATAQRTLHGLNPPESDTLREKNYRELSEIAEQAKKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00083 959 FunFam Plasma membrane ATPase 351 498 - -
Pte6g00083 959 Coils Coil 910 930 - -
Pte6g00083 959 CDD P-type_ATPase_H 37 851 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte6g00083 959 SMART Cation_ATPase_N_a_2 18 96 IPR004014 -
Pte6g00083 959 Gene3D - 103 825 - -
Pte6g00083 959 FunFam Plasma membrane ATPase 141 225 - -
Pte6g00083 959 Pfam haloacid dehalogenase-like hydrolase 335 612 - -
Pte6g00083 959 PRINTS H+-transporting ATPase (proton pump) signature 455 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 PRINTS H+-transporting ATPase (proton pump) signature 570 586 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 PRINTS H+-transporting ATPase (proton pump) signature 598 614 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 PRINTS H+-transporting ATPase (proton pump) signature 629 654 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 PRINTS H+-transporting ATPase (proton pump) signature 770 791 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 FunFam ATPase 4 plasma membrane-type 583 825 - -
Pte6g00083 959 FunFam Plasma membrane ATPase 491 646 - -
Pte6g00083 959 Gene3D - 908 959 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 598 617 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 188 202 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 339 353 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 515 525 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Pte6g00083 959 PRINTS P-type cation-transporting ATPase superfamily signature 493 504 - -
Pte6g00083 959 NCBIfam HAD-IC family P-type ATPase 110 358 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 NCBIfam HAD-IC family P-type ATPase 573 687 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00083 959 PANTHER CALCIUM-TRANSPORTING ATPASE 22 893 - -
Pte6g00083 959 SFLD C1.7: P-type atpase like 321 649 - -
Pte6g00083 959 SUPERFAMILY Calcium ATPase, transduction domain A 141 238 IPR008250 -
Pte6g00083 959 Pfam Cation transporter/ATPase, N-terminus 21 90 IPR004014 -
Pte6g00083 959 Gene3D - 336 635 IPR023214 -
Pte6g00083 959 Gene3D - 351 498 IPR023299 GO:0000166
Pte6g00083 959 Pfam E1-E2 ATPase 140 318 - -
Pte6g00083 959 SUPERFAMILY HAD-like 335 645 IPR036412 -
Pte6g00083 959 SFLD p-type atpase 321 649 IPR044492 -
Pte6g00083 959 SUPERFAMILY Calcium ATPase, transmembrane domain M 17 856 IPR023298 -
Pte6g00083 959 Gene3D - 141 225 - -
Pte6g00083 959 NCBIfam plasma-membrane proton-efflux P-type ATPase 37 816 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte6g00083 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 341 347 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00083 Pte-Chr6 721785 726485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00083 7 960 Primary Pumps ATPases AT2G07560 83.229 0.0 1609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00083 K01535 - zju:107408630 1666.74