Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00079 ATGGACAACGAGGAAGTTCCATCTTTTCCGTCAACACCAGCAACCCCAGGGACCCCTGGTGCTCCTCTCTTTGGTGGGTTTAGGACAGAGAGGACTGGCCACAATAAGAAATCCCTTCTCAAAAGTTGCAAGTGTTTCACTGTCGAAGAATGGGCATTGGAAGAAGGAACACTACCTTCTGTCTCTTGCTCATTGCCACCCCCTCCAGTTCCCCTAGCAAAGAAGGTTGGAGCTGAGTTTATAGGCACATTGATATTGATGTTTGCCGGGACAGCAGCTGCTATCGTTAACCAAAAAACACAGGGAGCTGAAACTCTCATTGGATGTGCAGCCACAACCGGACTTGCTGTGATGATCGTCATATTATCCACAGGACACATCTCTGGAGCTCATCTAAACCCAGCTGTGACCATTTCTTTTGCTGCTTTGAGACATTTTCCATGGAAACATGTGCCTGTGTACATTATTGCACAAGTTATGGGATCTCTGTGTGCTGCATTTATACTTAAGGGAGTGTTGCACCCAGTGCTTGGTGGTGGAGTCACTGTTCCGTCAGTGGGATATGGCCAAGCTTTTGCTTTAGAGTTCATTATTAGCTTCAACCTCATGTTTGTCGTCACTGCAGTGGCCACCGACACGAGAGCTGTTGGGGAGCTAGCCGGGATAGCAGTGGGAGCAGTAGTCATGCTCAACATACTCATCGCCGGGCCAGCAACGGGGGGCTCAATGAACCCCGTTAGAACACTGGGTCCAGCCATTGCAGTGAACAATTATAAAGCTATATGGGTCTATCTAACAGCTCCAATAATAGGGGCTCTGTGTGGGGCTGGAACCTACACTGCTGTCAAGCTGCCAGAAGAAGATGAAGAGAAGCAGGGAAAACCTTCCGCTGTAACAAGTTTCAGAAGGTGA 912 0.4868 MDNEEVPSFPSTPATPGTPGAPLFGGFRTERTGHNKKSLLKSCKCFTVEEWALEEGTLPSVSCSLPPPPVPLAKKVGAEFIGTLILMFAGTAAAIVNQKTQGAETLIGCAATTGLAVMIVILSTGHISGAHLNPAVTISFAALRHFPWKHVPVYIIAQVMGSLCAAFILKGVLHPVLGGGVTVPSVGYGQAFALEFIISFNLMFVVTAVATDTRAVGELAGIAVGAVVMLNILIAGPATGGSMNPVRTLGPAIAVNNYKAIWVYLTAPIIGALCGAGTYTAVKLPEEDEEKQGKPSAVTSFRR* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00079 303 FunFam Aquaporin NIP2-1 62 294 - -
Pte6g00079 303 Pfam Major intrinsic protein 72 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 NCBIfam MIP family channel protein 78 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 SUPERFAMILY Aquaporin-like 71 289 IPR023271 -
Pte6g00079 303 CDD MIP 74 279 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 ProSitePatterns MIP family signature. 131 139 IPR022357 -
Pte6g00079 303 Gene3D Glycerol uptake facilitator protein. 69 296 IPR023271 -
Pte6g00079 303 MobiDBLite consensus disorder prediction 1 28 - -
Pte6g00079 303 PRINTS Major intrinsic protein family signature 194 212 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PRINTS Major intrinsic protein family signature 225 247 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PRINTS Major intrinsic protein family signature 150 169 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PRINTS Major intrinsic protein family signature 113 137 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PRINTS Major intrinsic protein family signature 74 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PRINTS Major intrinsic protein family signature 262 282 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pte6g00079 303 PANTHER AQUAPORIN NIP2-1 39 287 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00079 Pte-Chr6 667266 670508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00079 1 304 Major Intrinsic Protein MIP AT1G80760 79.355 8.16e-172 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00079 K09874 - qsu:112009900 474.167