Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00077 ATGTCAGGTCAATCCCAGCGTCTCAATGTGGTCCCGACAGTCACCATGCTTGGGGTGATGAAAGCTCGTCTTGTCGGAGCCACAAGAGGCCATGCTCTCCTCAAGAAGAAGAGTGATGCTTTGACTGTGCAATTCCGTCAGATCCTTAAGAATATTGTTTCAACAAAAGAATCAATGGGTGACATCATGAAAACTTCGTCTTTTTCATTAACAGAAGCTAAGTATGTTGCTGGTGACAACGTTAAACATGTAGTGCTTGAAAATGTTAAGGACGCTTCACTTAAGATTCAACAATGCAGGCTTGCTTTTATAAAATCAATTGAGGTTCTTGTTGAGTTGGCTTCACTCCAAACCTCGTTTTTGACATTGGACGAGGCCATCAAGACCACTAATAGGAGAGTAAATGCTCTTGAGAATGTGGTGAAACCGAGGTTGGAAAATACCATTACTTACATTAAAGGAGAGTTGGATGAGTTGGAAAGAGAAGATTTCTTTAGGTTGAAGAAGATACAAGGGTATAAGAAAAGAGAGATTGAGAAGCAGATAGAGGCTGCTAAGCTTTTTGCTGTGGAGAAGCAGTTGGAGGAAGTGTCATTGAGGAAAGGAATTTCTATCAGTTCAGCTCAAAATTTGTTGTCTGTTGGTTCAGGAAAGGATGAGGATATAATTTTCTGA 675 0.4059 MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRQILKNIVSTKESMGDIMKTSSFSLTEAKYVAGDNVKHVVLENVKDASLKIQQCRLAFIKSIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTITYIKGELDELEREDFFRLKKIQGYKKREIEKQIEAAKLFAVEKQLEEVSLRKGISISSAQNLLSVGSGKDEDIIF* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00077 224 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 95 224 IPR002699 GO:0046961
Pte6g00077 224 Coils Coil 142 162 - -
Pte6g00077 224 Gene3D - 1 93 - -
Pte6g00077 224 Gene3D - 94 184 - -
Pte6g00077 224 NCBIfam V-type ATP synthase subunit D 90 175 IPR002699 GO:0046961
Pte6g00077 224 Pfam ATP synthase subunit D 93 171 IPR002699 GO:0046961
Pte6g00077 224 Pfam ATP synthase subunit D 17 96 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00077 Pte-Chr6 641023 642027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00077 1 225 Primary Pumps ATPases(2) AT3G58730 68.321 2.04e-124 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00077 K02149 - tcc:18612121 353.214