Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00075 ATGGATTACTCATCCGCATGTTCAAATACTTCCTTGGATCTTAATATCAGTCCTCTCAGAATTCCTGATACAGCTTCTGCTGGTGCTTTAATGGAGGAATTGAACTGGGTTACTGCAGAAAATAAAAGGTTGACTGAAATGCTAACTGAGATGTGTGGAAACTACAATGCTTTGCGAAATCATTTGATGGATTATATAAGAAAGACCCCAGAAAAAGAGTTGAGCTCATCAAAGAAAAGAGAGTCAGAAAGCAGCAATAATAACAATAGCAATAAACCTGCAATCGATGGAAACTCAGGCAGCAGCACAATTGACGAAGAATCATATAAGCAACGAAGGGAAGAGAACATCAAGGCCAACATATCAAGTGTATGTGTCAAGACAGAAGCATCTGTTACAGGCCTTGTTGTGAAGGATGGATATCTATGGAGGAAGTATGGTCAAAAGGTGACAAGAGATAATCCTTGTCCAAGGGCATATTTCAAGTGCTCTTTCGCTCCAAGCTGTCCGGTCATCAAAAAGAAGGTGTCAAATTTTGTGGCAGAATCATAA 552 0.3967 MDYSSACSNTSLDLNISPLRIPDTASAGALMEELNWVTAENKRLTEMLTEMCGNYNALRNHLMDYIRKTPEKELSSSKKRESESSNNNNSNKPAIDGNSGSSTIDEESYKQRREENIKANISSVCVKTEASVTGLVVKDGYLWRKYGQKVTRDNPCPRAYFKCSFAPSCPVIKKKVSNFVAES* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00075 183 Gene3D WRKY domain 122 181 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g00075 183 Pfam WRKY DNA -binding domain 138 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g00075 183 SUPERFAMILY WRKY DNA-binding domain 135 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte6g00075 183 ProSiteProfiles WRKY domain profile. 136 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte6g00075 183 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 175 IPR044810 GO:0003700
Pte6g00075 183 MobiDBLite consensus disorder prediction 71 111 - -
Pte6g00075 183 MobiDBLite consensus disorder prediction 81 105 - -
Pte6g00075 183 SMART WRKY_cls 137 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00075 Pte-Chr6 623786 625018 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00075 1 182 WRKY Transcription Factor Family AT1G80840 53.927 8.70e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte6g00075 WRKY 8.7e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00075 - - qsu:111983152 201.83