Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00073 ATGTGCAGCAATGTATTGGCTATGATCAAGAACATGATTGACGGTGATATAGCAAGTTACGAGGGGAAGTTGGCCCCCAATGGCCGAAAGCTCGGTGAGGTGGAAAATCATAGAGATAGGCAGATTTTACAATCATCAACGGTGAGGCCTGATGTAGTGGTGGCAGCAGATGGCAGTGGCAACTTTAGAATTGTGTCTGCAGCAGTGGTTGCTGCCCCAGAGAAGAGTAGCAGGAGATATATCATTAGAATAAAAGCATGTATATATAGAGAAACGTGGAGAGTATGTCAAAGTGTGGGGCAGTAA 306 0.451 MCSNVLAMIKNMIDGDIASYEGKLAPNGRKLGEVENHRDRQILQSSTVRPDVVVAADGSGNFRIVSAAVVAAPEKSSRRYIIRIKACIYRETWRVCQSVGQ* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00073 101 Gene3D - 19 99 IPR012334 -
Pte6g00073 101 SUPERFAMILY Pectin lyase-like 46 96 IPR011050 -
Pte6g00073 101 Pfam Pectinesterase 51 95 IPR000070 GO:0030599|GO:0042545
Pte6g00073 101 PANTHER PECTINESTERASE 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00073 Pte-Chr6 619929 620234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00073 1 97 Carbohydrate Esterase AT3G14310 46.774 4.37e-22 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00073 K01051 - oeu:111405079 111.694