Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00072 ATGAGCAAGCTAAAACAAGTGTTTGCTAGTGTATCAAACACTAGCAAACACATTTCCATATCTAAAAAAAACAAGAAGCTCCTAGGTTTTTCTGTTTCATTATTTCTTGTTGTTGCTATTGTTGGCATTGTTGCTAGTGTCAATTCCCACAAGAATTCAAGTGATGACAATGTCAGATCCGTTTCTTCACATGCCATTGTTAAAAGTTCATGTGGCAGCACATGGTACCCAGGCCTATGCTTTTCTTCCATAGCAAATGCTCTTGCTATTGTAAAATCCAATCTGTCGAGCCAAAAAGATGTGATAGAAATATGTTTGAATCTAACCACTGAGCCAGTAGAGCATAACTATTTCGGCATCAAAAAGATTCTGCAAACTCAGGAAAAACTTACCACATGTGAGAAAATTGCTCTGCATGATTGCTTAGAAACCATAGATGACACCCTTGATGATCTTCATAAAATCAAGGAAGATCTCCATGAATGA 486 0.3704 MSKLKQVFASVSNTSKHISISKKNKKLLGFSVSLFLVVAIVGIVASVNSHKNSSDDNVRSVSSHAIVKSSCGSTWYPGLCFSSIANALAIVKSNLSSQKDVIEICLNLTTEPVEHNYFGIKKILQTQEKLTTCEKIALHDCLETIDDTLDDLHKIKEDLHE* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00072 161 Gene3D Invertase/pectin methylesterase inhibitor family protein 60 161 IPR035513 -
Pte6g00072 161 Pfam Plant invertase/pectin methylesterase inhibitor 66 155 IPR006501 GO:0004857
Pte6g00072 161 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 66 159 IPR035513 -
Pte6g00072 161 NCBIfam pectinesterase inhibitor domain 36 159 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00072 Pte-Chr6 619285 619770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00072 41 161 Carbohydrate Esterase AT1G53830 52.066 4.09e-33 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00072 K01051 - qsa:O6P43_027478 161.77