Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00068 CCAAACCTTCCGAAGATCCCACACAAGTACAAGCGCCAAGCAATCCAGCAAGCACAAAAAGCCCTCACAGACTATCTCCATGGTACAAGGTCTTTGCCGTATGCATATGCCGAGCACATTGGCAAGAATTCCATTTTCTCCCTCTGCAACTTAATGTCAAGGTTGGATTTTTCAGCTCCTCGGTTTGTCAGAAACTTCCAGAAGTTCTTAAGGTACAACCCCATCAACGAATTTGAGTTTTTCTTCGAGAGCATCGGCATAGATCGCCATGAGGTCTCTTGGTTTTTGCCTGTGAAGAGGTTCTTCTTGTCTGAAGATGACACTGTTCTGAATGCTGCATGCGCACTTTCTGATTATGGGTTTCCATGGACTATGCTCGGAATGCTGTATAAGGAGAAAGTTTCGATTTTCAGAACAAGCTCTGAGGAGTTGACTGCCAGGCTTTCTGGGTTTAAGAAATATGGGTTTGAAAATGTTGCTGTAATTGGCATATGTTTGGCTTTTCCTCATTTGTTAACTGTAGAATGTGAAGAGGCTAGCGAGGTTGATCCATTTTTTGCTGACATGAAAAGCCTTTTCGTAGTTTCTGATTTAGCAAGTTGTATTGAGGGGAATGTAGATTCATGGTATGATGTCTGTAAAAAGATTAGGGTGTTTTACAATTTGACTGGTATGAAATGGAAATTAATAGAGCTTATGGGTAAGAGGAAGCATGTTTTTCTCGAAAATGAAGAAGAGGTTTTGATCCAGAAAGCAGAGTATTTCATTAGATTTGGTGTTAATAAGGAGGAAGTTGCTGCGTTGCTTCTACAAGCACCTGAACTGCTGAAACTTGATATGGAAACGCCAGTAATTTGCGTATTGAAGTTTTTACGTCATTTTGGATTGAGCTCAAAAGAGGTGCAGGATGTCAAGCTAAATTACACACATGTTCTGGGAACAAACAGAATGTGTAATTTGCCTCAAATCATGAGGGCTTTGCATTTACATGAATGGTTCTTGAACAAGATCAAGGAAGGAAAAACAAGGTTGTTGGCTAATTATATTAAACGTCATACTGAAGAAGAACTGAATCAAGAATATAGAGAAGGCTTGGAGCGGGTTCAAACTTCAAGAAACCACATTCATACAATGAGCAAGTTAAAATTCTTGCACGGGATTGGTTTTGGAGAGAACCCTTTGACCATGAAAGTATTAGTTCACTTGCATGGGACAAGCAGCGAGTTACAAGAAAGGTTCGACTGTCTTCTTCATTTAGGGATTGAATTTGCAAAACTGTCAAAGATGGTCAGTATGACTCCGAAGATTTTAAATCAAAAGCCTGAGATTCTAGAACAAAAATCAAATTTCCTATGTCAAGAGATGGGGTTATCCTTACACTACCTGGAAACTTTCCCAACATTTTTGTGTTTTGATTTGGAGAATAGAATTAAACCTAGGTACAGATTTCACATTTGGCTTGGAAAAATGGGTTTCTGTACAAGGGAGTACTCTATTGCTAGCATAGTTGCTACAAGTGAAAAAGGTTTCATAGCTCGGCTGAAAACTATCCACCCGGATGCTGTTAAATACTGGCTTGATTACACCTCTCTCAGT 1596 0.396 PNLPKIPHKYKRQAIQQAQKALTDYLHGTRSLPYAYAEHIGKNSIFSLCNLMSRLDFSAPRFVRNFQKFLRYNPINEFEFFFESIGIDRHEVSWFLPVKRFFLSEDDTVLNAACALSDYGFPWTMLGMLYKEKVSIFRTSSEELTARLSGFKKYGFENVAVIGICLAFPHLLTVECEEASEVDPFFADMKSLFVVSDLASCIEGNVDSWYDVCKKIRVFYNLTGMKWKLIELMGKRKHVFLENEEEVLIQKAEYFIRFGVNKEEVAALLLQAPELLKLDMETPVICVLKFLRHFGLSSKEVQDVKLNYTHVLGTNRMCNLPQIMRALHLHEWFLNKIKEGKTRLLANYIKRHTEEELNQEYREGLERVQTSRNHIHTMSKLKFLHGIGFGENPLTMKVLVHLHGTSSELQERFDCLLHLGIEFAKLSKMVSMTPKILNQKPEILEQKSNFLCQEMGLSLHYLETFPTFLCFDLENRIKPRYRFHIWLGKMGFCTREYSIASIVATSEKGFIARLKTIHPDAVKYWLDYTSLS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00068 532 SMART mt_12 427 458 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 SMART mt_12 459 493 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 SMART mt_12 230 261 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 Pfam mTERF 219 315 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 Pfam mTERF 402 510 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 FunFam Transcription termination factor MTEF18, mitochondrial 365 525 - -
Pte6g00068 532 PANTHER CGI-12 PROTEIN-RELATED 119 514 IPR003690 GO:0003690|GO:0006355
Pte6g00068 532 Gene3D Transcription termination factor 3, mitochondrial 365 526 IPR038538 -
Pte6g00068 532 Gene3D Transcription termination factor 3, mitochondrial 48 191 IPR038538 -
Pte6g00068 532 Gene3D Transcription termination factor 3, mitochondrial 205 338 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00068 Pte-Chr6 583586 585181 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pte6g00068 mTERF 1.1e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00068 - - cave:132190786 702.59