Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00053 ATGAAAGAGAAAGAGAAACACATGGAGAAAAAAAATTTTCCAATCGGGGCTGAGCATTATGAACTCTATGAGGAGATCGGCCAGGGTGTGAGTGCTGTTGTACATCGGGCTTTCTGTAAGGAGCTCAATGAGGATGTTGCCATCAAAATTTTGGACTGCGATCGTGACAATACTGACTTGAATAACATCTCACGGGAATCACAGACCATGATGTTGGTTGATCATCCTAATGTCCTTAAATCATATTGTTCATTTGTTAGTGATAAAAATTTGTGGGTTGTCATGCCATTTATGGCTGGCGGGTCTTGTCTCCATATACTAAAAGCAGCATATTCCAATGGTTTTGAGGAGAATATAATAGCCACAATATTGAAAGAGGTGTTGAAGGGGTTAGATTATCTTCATCAGCATGGACATATACACAGAGATGTCAAAGCAGGGAATATTCTTATTGATGCACGTGGAAATATAAAACTTGGAGATTTTGGTGTTTCTGCTTGTCTTTTTGATTCAGGTGATAGGCAACGGATGAGGAACACATTCGTTGGTACGCCTTGTTGGATGGCACCAGAGGTTATGGAGCAAATACGTGGTTATGATTGCAAAGCTGATATTTGGTCGTTTGGTATAACTGCTTTGGAGCTTGCTCATGGTCATGCTCCATTCTCAAAGTATCCCCCTATGAAGGTGTTACTTATGACTTTGCAAAATGCACCACCTGGCCTTGATTATGAAAGAGACCGAAAGTTCTCTAAGTCTTTTAAACAAATGATTGCTAGTTGCTTAGTGAAAGATCCTTCAAAAAGACCTTCTGCGAAGAAGTTACAGAAACATTCATTTTTCAAACAAGCTCGATCTAATGACTATATTGCAAGGTCACTTTTAGAGGGGTTACCTGCTCTAGGTGACCGCATGAAGGCCTTGAAGAGAAAAGAAGAAGACATGCTTGCACAAAAGAAGATGCCTGATGGACAGAAGGAGGAGCTGTCGCAGAATGAATACAAACGAGGAATTAGTGGTTGGAATTTCAATCTTGATGATATGAAGGCCCAAGCTTCCCTGATCCAGGATTTTGATGACCCTGGGAATGACAATCTAATGGATGATATCAATGATGTACAAAATCGATTGGCCTCCGTCCCGTTGTTTGCTAGGATGAGAAGCGAAAAATCCGATGATGATTCTAGCCTGACTAGTTCGAGCTATGAACATTACGCTTCGCAGACTCCTTCTCCCCGCTGTGAGAATCATTGTGAGAATAATTTTGGTGAAAAGTCTGAGTTAGAGGATGGTGCAAGATACATGGAGAATACAGCTGCTTACCATCAAAAAGGACTTTCATCAGGAACCTTACCTGAAATCATTTTACCACAAACTAGAAGAGAGAGTGATAAATCACCAAAGCAGCCGAATGCTCCAAGTATTGCAGCAACAGTTCAACAGCCAGGAGATGCAAATTTTGATGAAATTGATGATAAAACAAAGGCACCTGTTGTTCAGCAGAAGGGACGATTTAAGGTCACATCTGAGAATATTGACCTCGAAAAGGTGGCTCCATCTCCTGGACTGCCGAAGAGTCAGAGCTTGCAGGTGATCAATTCCCACACTGCACTTTCGAGTCTATCAGGTTTGCCAGTACCATCATCTGATGCTGTGCCATCAAATGTTTCTGGCTGTTCAATTTTTACAGCATTGCATGCTATTTTGCAGACAAATATCCTTGAAAGGGAGCACATATTGAGTTTAATTCAGCAATTTGCTTCAGCCAATTGTGCTGCTGATGGAACTTATGGACCAGGGAGGATTGGCACAATGGAGAAATCTGTGCTTGAGGAAGCTCATGATAGGGAAAAAGAGTTACTTGAGGAGATGACGGAGCTGCGATGGAGGCTCATCCGCGCCCAGGATGAGATCCAAAAACTAAAGAAAGACAATACTCAGGTCTAA 1947 0.4176 MKEKEKHMEKKNFPIGAEHYELYEEIGQGVSAVVHRAFCKELNEDVAIKILDCDRDNTDLNNISRESQTMMLVDHPNVLKSYCSFVSDKNLWVVMPFMAGGSCLHILKAAYSNGFEENIIATILKEVLKGLDYLHQHGHIHRDVKAGNILIDARGNIKLGDFGVSACLFDSGDRQRMRNTFVGTPCWMAPEVMEQIRGYDCKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDRKFSKSFKQMIASCLVKDPSKRPSAKKLQKHSFFKQARSNDYIARSLLEGLPALGDRMKALKRKEEDMLAQKKMPDGQKEELSQNEYKRGISGWNFNLDDMKAQASLIQDFDDPGNDNLMDDINDVQNRLASVPLFARMRSEKSDDDSSLTSSSYEHYASQTPSPRCENHCENNFGEKSELEDGARYMENTAAYHQKGLSSGTLPEIILPQTRRESDKSPKQPNAPSIAATVQQPGDANFDEIDDKTKAPVVQQKGRFKVTSENIDLEKVAPSPGLPKSQSLQVINSHTALSSLSGLPVPSSDAVPSNVSGCSIFTALHAILQTNILEREHILSLIQQFASANCAADGTYGPGRIGTMEKSVLEEAHDREKELLEEMTELRWRLIRAQDEIQKLKKDNTQV* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00053 648 CDD STKc_OSR1_SPAK 18 281 - -
Pte6g00053 648 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
Pte6g00053 648 MobiDBLite consensus disorder prediction 460 483 - -
Pte6g00053 648 Coils Coil 607 644 - -
Pte6g00053 648 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 8 643 IPR047173 GO:0043539
Pte6g00053 648 FunFam serine/threonine-protein kinase BLUS1 isoform X1 101 334 - -
Pte6g00053 648 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pte6g00053 648 Gene3D Phosphorylase Kinase; domain 1 8 97 - -
Pte6g00053 648 ProSiteProfiles Protein kinase domain profile. 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00053 648 MobiDBLite consensus disorder prediction 398 416 - -
Pte6g00053 648 MobiDBLite consensus disorder prediction 388 416 - -
Pte6g00053 648 SMART serkin_6 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00053 648 Gene3D Transferase(Phosphotransferase) domain 1 101 335 - -
Pte6g00053 648 FunFam Serine/threonine-protein kinase BLUS1 9 97 - -
Pte6g00053 648 Pfam Protein kinase domain 20 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00053 Pte-Chr6 459740 471277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00053 8 630 MAP Kinase Kinase Kinase Kinase AT1G79640 60.118 0.0 776
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pte6g00053 Pkinase 8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00053 K08835 - gmx:100780339 853.203