Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00049 ATGGCTCCCATAGAAACGCTGCAACAGAAAGAAATCATTTTCCGATCAAAACTACCAGACATCTGCATCCCCAAACACCTTCCTCTGCATTCCTATGTATTTGAAAACTTATCAAAGTTTGGATCACGCCCTTGCTTGATCAATGGATCCACAGGGGATATCTATACCTACTATGATGTTGACCTCACTGCTAGAAAAGTTGCCTCAGGGATCAACAAGCTTGGAGTCAAACAAGGTGAAGTGATCATGGTTTTGCTTCCCAATTCACCTGAATTCGTCTTCTCCTTCCTCGGTGCTTCATACCGTGGCGCCATGACCACTGCTGCCAACCCCTTTTTCACGCCGGCTGAGATTGCCAAGCAAGCAAAAGCATCCAAAGCAAAGATCCTCATCACTCAAGCCTCTTACTTTGACAAAGTCAAGACTTTAGAAGATGTCAAACTCATATTCACAGACACCCCACCAAAAGGGTATTCGCATTTTTCAGAGTTGACTCAAGCGGATGAGAATGAATTGCCTGAGGTGGATATCCGTCCTGATGATGTAGTTGCATTGCCTTATTCATCTGGGACGACTGGTTTGCCCAAAGGGGTGATGCTGACTCACAAAGGGTTGGTGACCAGTGTTTCCCAACAGGTGGATGGAGACAATCCCAACCTGTATTACAGTGCTGAGGATGTTGTTCTCTGTGTGCTTCCTCTGTTTCACATTTACTCCCTCAACTCTGTTTTCCTCTGTAGTTTGAGAGCTAAAGCTACCATTTTGATCATGCCGAAGTTTGAGATTAATTCATTGTTGGGTCTGATTGAGAAATATAAAGTAACGATCTTACCCGTTGTGCCTCCTATTATATTGACAATAGCGAAGTCCCCGGATCTTGATAAATATGACTTGTCCTCCATTAGAGTGTTGAAGTCTGGAGGGGCACCACTCGGAAAGGAACTTGAAGACACAGTTAGGGCCAAATTCCCAAAGGCTAGACTTGGTCAGGGCTATGGGATGACAGAGGCAGGTCCAGTGTTGACAATGAGTATGGCTTTTGCCAAGGAACCCATAGATGTAAAACCAGGTGCATGTGGGACAGTTGTGAGAAATGCAGAACTAAAAATTGTTGATCCAGAAACCGGTGATTCTTTGCCCAGAAACCAGGCTGGTGAAATTTGCATCAGGGGTGATCAGATCATGAAAGGTTACCTTAATGATCCAGAGGCTACAGGGAGGACCATAGACGAAGAGGGGTGGTTGCACACCGGTGATATTGGTCTTGTGGATGAGGATGATGAGCTGTTCATCGTTGATAGGTTGAAAGAATTGATTAAATACAAAGGTTTCCAGGTGGCCCCAGCTGAGCTGGAGGCGCTTCTTCTCACCCACCCTAAAGTCTCTGATGCTGCTGTGATCCCGATGAACGACGAAGCAGCTGGAGAAGTACCTGTTGCATATGTTGTGAGATCCAATCGTAACAGTGAAGTTACAGAGGATGAAATCAAACAGTTCATTTCAAAGCAGGTGGTGTTTTACAAAAGAATAAGTAGAGTGTTTTTCATTGATGCCATTCCCAGGTCACCATCAGGAAAAATATTGAGGAAGGATTTAAAAGCAAAGCTGGCAGCTGGAGCACCAAAGTAA 1629 0.4481 MAPIETLQQKEIIFRSKLPDICIPKHLPLHSYVFENLSKFGSRPCLINGSTGDIYTYYDVDLTARKVASGINKLGVKQGEVIMVLLPNSPEFVFSFLGASYRGAMTTAANPFFTPAEIAKQAKASKAKILITQASYFDKVKTLEDVKLIFTDTPPKGYSHFSELTQADENELPEVDIRPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVSQQVDGDNPNLYYSAEDVVLCVLPLFHIYSLNSVFLCSLRAKATILIMPKFEINSLLGLIEKYKVTILPVVPPIILTIAKSPDLDKYDLSSIRVLKSGGAPLGKELEDTVRAKFPKARLGQGYGMTEAGPVLTMSMAFAKEPIDVKPGACGTVVRNAELKIVDPETGDSLPRNQAGEICIRGDQIMKGYLNDPEATGRTIDEEGWLHTGDIGLVDEDDELFIVDRLKELIKYKGFQVAPAELEALLLTHPKVSDAAVIPMNDEAAGEVPVAYVVRSNRNSEVTEDEIKQFISKQVVFYKRISRVFFIDAIPRSPSGKILRKDLKAKLAAGAPK* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00049 542 CDD 4CL 23 532 - -
Pte6g00049 542 Pfam AMP-binding enzyme C-terminal domain 450 526 IPR025110 -
Pte6g00049 542 ProSitePatterns Putative AMP-binding domain signature. 185 196 IPR020845 -
Pte6g00049 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 534 - -
Pte6g00049 542 Gene3D - 436 538 IPR045851 -
Pte6g00049 542 FunFam 4-coumarate--CoA ligase 2 437 539 - -
Pte6g00049 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 15 436 - -
Pte6g00049 542 Pfam AMP-binding enzyme 35 441 IPR000873 -
Pte6g00049 542 SUPERFAMILY Acetyl-CoA synthetase-like 15 538 - -
Pte6g00049 542 Gene3D - 7 435 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00049 Pte-Chr6 438537 442368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00049 8 504 Monolignol Biosynthesis Gene Families AT1G51680 68.701 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00049 K01904 - qsa:O6P43_027979 863.603