Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00047 ATGAAATCCAGTCTGCCGTCTCGAGGAACCGGAAATGGACCCGCCTCCGACGGGTCGAACCGGGAGCGAACCAATCGCCGCCGCAGTGACCTGACCTTGCCTCTGCTACACCGAAATACTACCCAATTAGCTGTGCCTTTACCTTTGCCTCCGAACTCGGCTACGTCAACGGGTCTCAACCAGGGAAACTCGCTCGGACCCACAACCATACTCAGACATCAAACCATCCCGTTCTCCGAGCTTGAACGGCTCAGCAGAATCGGAAGCGGAGCTGGTGGCACCGTCTACAAGGTCCAACACCGGCCCACCGGTCGTTTCTTTGCTCTCAAAGTCATATATGGGCACCATGAGGAAACGGTCAGACACCAGATCCGTAGAGAGATCCAGATCCTCCGTGATGTCAACAACCCGAACGTTGTCAAGTGTCATGAGATGTTCGACCATAACGCCGAAATCCAAGTGCTTCTGGAATTCATGGATGGTGGGTCTTTGGAAGGGACGCATATCCCAGATGAACGGCGCCTTGCTGATCTAGCTCGTCAGATTCTCTGTGGCCTAGCTTACCTCCACAAAAGACATATTGTTCACAGAGATATTAAGCCTTCAAATTTATTGATCAACGAAAGGAAGCAAGTGAAGATTGCAGATTTTGGGGTGTCGAGGATTCTAGCACAGACCATGGATCCGTGTAACTCATCGGTTGGTACTATTGCTTATATGAGTCCAGAAAGAATCAATACAGATCTCAATGATGGTCAATATAATGCGTATGCCGGAGACATATGGAGTCTCGGGGTTAGCATATTGGAATTTTATCTTGGTCGCTTTCCATTTGGGGTTGGAAGGCAAGGTGATTGGGCTAGCTTGATGTGCGCCATTTGTATGTCACAGCCACCGGTGGCACCTGTCACTGCTTCAAGGGAATTCAAGGACTTCATAGCTTGTTGTTTGCAGAAAGAACCTTCCAAGAGATGGACAGCTGTTCAGCTGTTAAGTCATCCTTTTGTAGCTCAAGCTACAGGGCAAAACCCTCAGGTTCATCAGAACCTTCATCAGCAATTACCACCACCGCTACAGCCCGCTTCAGAACCATAG 1095 0.4959 MKSSLPSRGTGNGPASDGSNRERTNRRRSDLTLPLLHRNTTQLAVPLPLPPNSATSTGLNQGNSLGPTTILRHQTIPFSELERLSRIGSGAGGTVYKVQHRPTGRFFALKVIYGHHEETVRHQIRREIQILRDVNNPNVVKCHEMFDHNAEIQVLLEFMDGGSLEGTHIPDERRLADLARQILCGLAYLHKRHIVHRDIKPSNLLINERKQVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNDGQYNAYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPVAPVTASREFKDFIACCLQKEPSKRWTAVQLLSHPFVAQATGQNPQVHQNLHQQLPPPLQPASEP* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00047 364 ProSiteProfiles Protein kinase domain profile. 81 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00047 364 Gene3D Transferase(Phosphotransferase) domain 1 164 357 - -
Pte6g00047 364 FunFam Mitogen-activated protein kinase 2 161 348 - -
Pte6g00047 364 CDD PKc_MAPKK_plant_like 79 339 - -
Pte6g00047 364 SMART serkin_6 81 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00047 364 Pfam Protein kinase domain 82 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte6g00047 364 MobiDBLite consensus disorder prediction 1 34 - -
Pte6g00047 364 Gene3D Phosphorylase Kinase; domain 1 66 160 - -
Pte6g00047 364 MobiDBLite consensus disorder prediction 1 19 - -
Pte6g00047 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pte6g00047 364 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 50 345 - -
Pte6g00047 364 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Pte6g00047 364 SUPERFAMILY Protein kinase-like (PK-like) 68 344 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00047 Pte-Chr6 426386 427480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00047 26 352 MAP Kinase Kinase Gene Family AT1G51660 71.471 5.89e-166 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte6g00047 Pkinase 4.8e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00047 K13413 - gmx:100786390 499.204