Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte6g00003 ATGGGGACAGAAGCATTGGATGCAGTTATCAAGGAAGCTGTTGATCTCTCACTTGGATCCATTTATTTTATAATGCCTGAGATACCGAATTTTCAAATGCAGGAGAACATCCCTATTGAAGAGGTGTTTGAGCATCTTCAATGCGCAACGGATGGTCTCAGCTCCGAAGAAGCTCAGAAGCGCCTGGATATGTTTGGATATAACAAACTTGAAGAAAAGAAGGAGAGTAAATTACTCAAGTTCTTGGGGTTTATGTGGAACCCTCTATCATGGGTCATGGAAGCTGCAGCCCTCATGGCAATTGGACTGGCACATGGAGGGGATAAGCCAGGAGACTATCAAGACTTCGTGGGAATCGTAATCCTACTCATCATAAACTCTACCATCAGTTTCATAGAGGAAAATAATGCTGGCAATGCAGCAGCAGCCCTTATGGCTCGGTTGGCACCCAAGGCCAAGGTTGTCCTCCGCGATGGAAAATGGAATGAAGAAGACGCCTCTGTCTTGGTTCCAGGAGACATAGTCAGCATTAAGCTTGGTGACATTATTCCTGCAGATGCACGTCTCCTTGAAGGCGATCCTCTTAAGATTGATCAGGCAAGAGAGTCCCTTCCTGTAACTAAAAATCCTGGTGACGGAGTCTATTCTGGCTCAACTTGTAAGCAAGGTGAGATTGAAGCAGTAGTTATTGCTACAGGTGTGCACACCTTTTTTGGGAAGGCAGCACATCTAGTGGAGAACACCACACATGTTGGACATTTTCAACAGGTTCTTACGTCAATTGGGAACTTCTGTATCTGTTCCATTGCTGTCGGGATGCTAATAGAAATCATCGTTATATATGGAATTCAAAAGAGAGGATATCGAGTCGGCATCGATAATCTCCTTGTGCTGCTTATTGGTGGGATTCCTATTGCAATGCCAACGGTTCTTTCTGTCACAATGGCCATAGGTTCACATCGTCTGTCACAGCAGGGTGCCATTACTAAAAGGATGACTGCTATTGAAGAAATGGCTGGAATGGATGTGCTGTGCAGCGATAAAACAGGCACTTTGACACTAAACAAGCTCACAGTCGACAAGAATTTAATTGAAGTGTTTGCAAGAGATGTTGACAAGGATATGGTTGTGCTTATGGCTGCAAGAGCATCGAGGTTAGAGAATCAAGATGCCATTGATACTGCAATCGTTTCCATGTTGGCAGACCCTAAGGAGGCACGGGCTGGAATTCAAGAAGTCCACTTTCTTCCATTCAATCCCACTGATAAAAGAACAGCACTCACTTATCTTGACGATGCTGGTAAAATGCACAGAGTGAGCAAAGGTGCACCTGAACAGATTCTCAACCTGGCACATAACAGATCAGAGATTGCACATAGAGTACATGCAATTATCGATAAGTTTGCCGAACGTGGGCTGCGATCACTTGGAGTGGCCCGCCAGGAAGTACCGTCTGGGAACAAAGATAGTCCAGGAGGACCATGGGAGTTTGTAGGGCTTCTCCCTCTATTTGATCCTCCAAGGCATGATAGTGCTGAAACCATTAGAAGAGCTCTAAATCTCGGCGTAAGCGTCAAAATGATTACAGGAGATCAACTGGCAATTGGCAAAGAAACAGGAAGGCGTTTAGGGATGGGGAGCAACATGTATCCCTCTTCATCTTTGCTTGGAGAAACCAAGGATGGAAGTGTTCCTGTGCTACCTGTGGATGACCTCATTGAGCAAGCTGATGGCTTTGCCGGTGTCTTCCCTGAACATAAGTATGAGATAGTGAGCAGACTACAAGCAAGAAAGCACATATGTGGAATGACTGGTGATGGAGTCAATGATGCACCTGCCTTGAAGAAAGCTGACATTGGTATTGCTGTGGCTGATTCCACCGATGCTGCTCGTAGTGCTTCTGATATAGTTTTGACAGAACCTGGGTTAAGTGTAATCATCAGCGCTGTCTTAACAAGTCGTGCCATATTCCAAAGGATGAAGAATTACACGATATATGCTGTTTCCATCACTATTCGTATTGTGCTTGGCTTTATGCTTCTCAATGTCTTCTGGCAATTTGATTTCCCCCCTTTCATGGTTCTTGTGATTGCCATTCTAAATGATGGCACCATCATGACCATATCAAAAGACAGGGTGAAGCCATCTCCTATTCCTGATAGTTGGAAGCTTAGTGAAATTTTTGCAACTGGAATTGTTCTTGGTGGCTACTTGGCACTCATGACAGTCATATTCTTCTGGGCAGCTTATGAAACTAACTTCTTTCCACAACATTTTAAAGTGAGGGACTTCAACAAATCACACTTCAACATGTCAGATCAAGATGTAGCAGATGAACTTAACGCGAAAATGGCATCAGCTGTGTACCTTCAAGTTAGTACCATAAGTCAGGCCCTGATTTTTGTCACTCGCTCAAGGAGCTGGTCTTTCATGGAGAGACCTGGCCTTCTGCTTGTCATTGCCTTTATCATAGCTCAGCTGGTTGCCACTGTTATATCTGCCACATTAAGTTGGAAAATGGCTGGAATCAAAAGCATTGGATGGGGTTGGACAGGAGTGATTTGGTTATACAACACTATAACATATTTGCTTCTAGATCCTATCAAGTTTTGTGTCCGTTATGCATTGAGTGGAAGGGCTTGGAATCTTGTCGTAGACCAAAGAACAGCATTCACTAACCAGAAAGACTTTGGTAGAGAGGCTCGTTCAGCAGCATGGGCAGCTGAACAGCGAACCTTGCATGGCCTTCCATCTGCTGCAGGGGGATCAAGAAAATTGACTGACAGAAGCTCTTTCAAGGACATATCTGTCATGGCTGAAGAGGCCAAAAGACGTGCAGATATAGCAAGGATGAGGGAGCTTCATACACTCAAAGGCAAGGTCGAACAGGCTGCCAAGTTGCGTGGCATTGACATTGATGCCATGAACCAGCACTACACTGTCTAA 2946 0.4467 MGTEALDAVIKEAVDLSLGSIYFIMPEIPNFQMQENIPIEEVFEHLQCATDGLSSEEAQKRLDMFGYNKLEEKKESKLLKFLGFMWNPLSWVMEAAALMAIGLAHGGDKPGDYQDFVGIVILLIINSTISFIEENNAGNAAAALMARLAPKAKVVLRDGKWNEEDASVLVPGDIVSIKLGDIIPADARLLEGDPLKIDQARESLPVTKNPGDGVYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVENTTHVGHFQQVLTSIGNFCICSIAVGMLIEIIVIYGIQKRGYRVGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFARDVDKDMVVLMAARASRLENQDAIDTAIVSMLADPKEARAGIQEVHFLPFNPTDKRTALTYLDDAGKMHRVSKGAPEQILNLAHNRSEIAHRVHAIIDKFAERGLRSLGVARQEVPSGNKDSPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVSVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGETKDGSVPVLPVDDLIEQADGFAGVFPEHKYEIVSRLQARKHICGMTGDGVNDAPALKKADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLNVFWQFDFPPFMVLVIAILNDGTIMTISKDRVKPSPIPDSWKLSEIFATGIVLGGYLALMTVIFFWAAYETNFFPQHFKVRDFNKSHFNMSDQDVADELNAKMASAVYLQVSTISQALIFVTRSRSWSFMERPGLLLVIAFIIAQLVATVISATLSWKMAGIKSIGWGWTGVIWLYNTITYLLLDPIKFCVRYALSGRAWNLVVDQRTAFTNQKDFGREARSAAWAAEQRTLHGLPSAAGGSRKLTDRSSFKDISVMAEEAKRRADIARMRELHTLKGKVEQAAKLRGIDIDAMNQHYTV* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte6g00003 981 SFLD p-type atpase 327 655 IPR044492 -
Pte6g00003 981 Gene3D - 150 232 - -
Pte6g00003 981 NCBIfam HAD-IC family P-type ATPase 579 683 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 NCBIfam HAD-IC family P-type ATPase 119 365 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 ProSitePatterns E1-E2 ATPases phosphorylation site. 347 353 IPR018303 -
Pte6g00003 981 FunFam Plasma membrane ATPase 150 232 - -
Pte6g00003 981 Gene3D - 342 641 IPR023214 -
Pte6g00003 981 Gene3D - 357 504 IPR023299 GO:0000166
Pte6g00003 981 NCBIfam plasma-membrane proton-efflux P-type ATPase 52 834 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte6g00003 981 FunFam ATPase 4 plasma membrane-type 590 844 - -
Pte6g00003 981 SFLD Haloacid Dehalogenase 327 655 - -
Pte6g00003 981 Pfam haloacid dehalogenase-like hydrolase 341 618 - -
Pte6g00003 981 Gene3D - 112 844 - -
Pte6g00003 981 SUPERFAMILY Calcium ATPase, transduction domain A 151 245 IPR008250 -
Pte6g00003 981 PRINTS H+-transporting ATPase (proton pump) signature 604 620 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 PRINTS H+-transporting ATPase (proton pump) signature 635 660 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 PRINTS H+-transporting ATPase (proton pump) signature 576 592 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 PRINTS H+-transporting ATPase (proton pump) signature 789 810 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 PRINTS H+-transporting ATPase (proton pump) signature 461 479 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pte6g00003 981 CDD P-type_ATPase_H 52 870 IPR006534 GO:0008553|GO:0016020|GO:0120029
Pte6g00003 981 SMART Cation_ATPase_N_a_2 33 105 IPR004014 -
Pte6g00003 981 PRINTS P-type cation-transporting ATPase superfamily signature 627 639 - -
Pte6g00003 981 PRINTS P-type cation-transporting ATPase superfamily signature 499 510 - -
Pte6g00003 981 PRINTS P-type cation-transporting ATPase superfamily signature 345 359 - -
Pte6g00003 981 PRINTS P-type cation-transporting ATPase superfamily signature 521 531 - -
Pte6g00003 981 PRINTS P-type cation-transporting ATPase superfamily signature 604 623 - -
Pte6g00003 981 Gene3D - 930 981 - -
Pte6g00003 981 PANTHER CALCIUM-TRANSPORTING ATPASE 35 912 - -
Pte6g00003 981 SUPERFAMILY HAD-like 341 651 IPR036412 -
Pte6g00003 981 FunFam Plasma membrane ATPase 497 652 - -
Pte6g00003 981 SUPERFAMILY Calcium ATPase, transmembrane domain M 36 876 IPR023298 -
Pte6g00003 981 Pfam Cation transporter/ATPase, N-terminus 36 99 IPR004014 -
Pte6g00003 981 Pfam E1-E2 ATPase 148 324 - -
Pte6g00003 981 FunFam Plasma membrane ATPase 357 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte6g00003 Pte-Chr6 42380 47970 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte6g00003 4 982 Primary Pumps ATPases AT3G60330 78.332 0.0 1551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte6g00003 K01535 - rcu:8265793 1617.82