Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01678 ATGGATAGCAAGTCTTGCAGGACCTTCCTCACAAGCCTTCTCATGATTATTTTCTGCAGTTGTATCATAAATCCAACTGCAGCCATCGAAAAGCAAGGAGCATATACAATGTTCATTAGAACATCTTGCAGCGTCACAACGTATCCCAGACTTTGTTTCAGCTCATTAGCAAGCCAAGCAAATATGATTCAAACGAACCAACAACTTCTAACATGCGCAGCACTTAATGTGACCCTTTCCTCAACCAAATCAACTTTGGCCATGATGTCAACGCTCTCGCATAGCCACGGATTACAGCCCAGAGAAGTTGCTGCTATGAAGGACTGCGTAGAAGAGTTGAGGGACTCCGTTGATGAACTCAGAAGATCTATAAGTGAGATGGGTCTGCTCAATAGATCTGATTTTCAGCTTACCATGAATGATATACAGACTTGGGTGAGTGCTGCTATGACTGATGAAAGCACGTGTACGGATGGATTCCAAGAGCCGCAGGTAGATGGAGATGTCAAAATTGCTGTGCGGGGTAGAATTGTCACTGTGGCACAACTCACTAGCAATGCTCTCGCCTTGATCAATCAACTTGCCTCAACTCAATAG 597 0.4439 MDSKSCRTFLTSLLMIIFCSCIINPTAAIEKQGAYTMFIRTSCSVTTYPRLCFSSLASQANMIQTNQQLLTCAALNVTLSSTKSTLAMMSTLSHSHGLQPREVAAMKDCVEELRDSVDELRRSISEMGLLNRSDFQLTMNDIQTWVSAAMTDESTCTDGFQEPQVDGDVKIAVRGRIVTVAQLTSNALALINQLASTQ* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01678 198 Pfam Plant invertase/pectin methylesterase inhibitor 38 190 IPR006501 GO:0004857
Pte5g01678 198 Coils Coil 103 123 - -
Pte5g01678 198 NCBIfam pectinesterase inhibitor domain 13 194 IPR006501 GO:0004857
Pte5g01678 198 CDD PMEI-like_3 41 196 - -
Pte5g01678 198 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 190 - -
Pte5g01678 198 FunFam Pectin methylesterase inhibitor 1 34 194 - -
Pte5g01678 198 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 196 IPR035513 -
Pte5g01678 198 SMART PMEI_2 34 190 IPR006501 GO:0004857
Pte5g01678 198 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 195 IPR035513 -
Pte5g01678 198 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01678 Pte-Chr5 39212435 39213374 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01678 39 197 Carbohydrate Esterase AT1G53830 32.919 6.22e-24 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01678 - - qsa:O6P43_029909 231.876