Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01677 ATGGAATTCTTGGAGCTTAATGATTATTCAGCACCCAACATGACGTATGTCTTCAAAAACGAACCACAATCTTTGCAAACTTCAGATTTTAAAAGTGGAAGCATATTCAATTCTGAACTTTGCAGCGAAAGTTGCTTACTCGAACAAGAAACAACTAGTCCTGCTGATTGTTCATCTCACCTTTTCAACCCAGCCCAATTCAACTCATATCATATTAAACACTCCAAGCCTCCCAAATCTTCAAGTTTAAGCCAACGCCGTCCTTCTCTAAACATAGCTATACCCCCTTCAGGCTTGAATATGAGAAACACTGCCACTGCTGGTCATGGTACAGCAATTCATCAACAAGGGCAGGGTATGACTTCTACTGACAGTAAGCACTATAGAGGTGTCAGAAGGAGGCCATGGGGTAAGTTTGCAGCTGAGATTCGTGACCCTAGTAGGAAAGGGACGAGGGTGTGGCTTGGAACGTTTGATACCGCCATGGATGCTGCAAAAGCTTATGATAAAGCTGCTTTTACGTTAAGGGGAGCCAAAGCTATACTGAACTTTCCTCTTCAAGTTGAGAACTCAACTGGGTTTGAATTCGCTGCAAATCATATTGGTCAGAAAAGGAGAAGGCCATGTGAGAGTGAAGGCGATGGACAGGAAGGAGAAGCCCAGCTGAACAAGAGAGAGAATGATGGGGTCTCTGGAACAGTTTGTCCACTGACGCCGTCAAATTGGAAAGACGTTTGGGACACTGACATCAAGGGAATTTTCAGTGTCCCCCCGTTATCTCCGTTATCTCCTCATCCACCTATGGGAAATTCGCAGGTTCTAGTGGCGTGA 831 0.4477 MEFLELNDYSAPNMTYVFKNEPQSLQTSDFKSGSIFNSELCSESCLLEQETTSPADCSSHLFNPAQFNSYHIKHSKPPKSSSLSQRRPSLNIAIPPSGLNMRNTATAGHGTAIHQQGQGMTSTDSKHYRGVRRRPWGKFAAEIRDPSRKGTRVWLGTFDTAMDAAKAYDKAAFTLRGAKAILNFPLQVENSTGFEFAANHIGQKRRRPCESEGDGQEGEAQLNKRENDGVSGTVCPLTPSNWKDVWDTDIKGIFSVPPLSPLSPHPPMGNSQVLVA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01677 276 MobiDBLite consensus disorder prediction 70 99 - -
Pte5g01677 276 PRINTS Ethylene responsive element binding protein signature 128 139 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 PRINTS Ethylene responsive element binding protein signature 151 167 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 MobiDBLite consensus disorder prediction 256 276 - -
Pte5g01677 276 SMART rav1_2 127 191 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 MobiDBLite consensus disorder prediction 202 224 - -
Pte5g01677 276 PANTHER DNA-BINDING DOMAIN 85 206 IPR044808 GO:0003700|GO:0009873
Pte5g01677 276 SUPERFAMILY DNA-binding domain 127 187 IPR016177 GO:0003677
Pte5g01677 276 Pfam AP2 domain 127 177 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 CDD AP2 126 185 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 Gene3D AP2/ERF domain 126 188 IPR036955 GO:0003700|GO:0006355
Pte5g01677 276 FunFam Ethylene-responsive transcription factor 2 126 187 - -
Pte5g01677 276 ProSiteProfiles AP2/ERF domain profile. 127 185 IPR001471 GO:0003700|GO:0006355
Pte5g01677 276 MobiDBLite consensus disorder prediction 202 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01677 Pte-Chr5 39210298 39211907 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01677 80 277 AP2-EREBP Transcription Factor Family AT5G51190 48.529 1.99e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte5g01677 AP2 6.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01677 K09286 - jre:109002492 212.231