Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01668 ATGCCAGGCATACCTTTAGTCGCTCGTGAAACTTCCTATTCTAGAAGCACAGATCAAATGTGCCGTCAAGATTCTCGTGTGCATTTGTCTGCTGAAGAGGAGCTTGCTGCTGAAGAGAGCCTCTCGGTCTATTGCAAGCCTGTTGAGCTCTATAACATACTACAGCGGCGTGCTGTAAACAATCCATCATTTCTCCAGAGATGCTTGCGGTACAAAATCAAGGAAAAACACAAAAGGGGAATCAAAATGATGATTTCAGTATCTAGGATTAATGATGAGGTCCTCAACATGTTACCCTTGTACATAACTGTTGCAAGACTTGTTCCTCATGTTGGAGTTTCAGAGCAGTGCTCTGTGTATCGCTTCAAGCGAATTCACACCTTGACCAGTAACACTGCTGAGGGCCATACTCAAATCCAGGCAAACTTTTGTCTTCCTGAGGTTAACAAATTAGCAACACAGGCCACATCTCAGTCACTCGCAATCTTATTTTTCACCTGTGTCAAGACTCTAAAATCTTCTGCAACAATTGATGAGGGACAATGTTTTCTGGATGTCCTTGCACAATCTAAAGAACACTACTGCTTGTGGGGAAAAATACCATTGGAATCCCTTTATAGAAATTGGGAGTCATTGCCAAACTTTATTTGGGGACAAAGGGCTGATTTCATATGCACAATTGATCTGCTCCCTTGCTTTCTCAAGTCAAATCATTTAAACAAGAATAAGTGCATCACAATTGAAGCTCCTTGTAATCCTGAAACCATGAATATATCAAAAAGAATGCAAATCACAATTTGCGCACAAGAGTTTGGGGCAAGGGAAAATTCCATCTATAGTACATACACTTCGCATGGCAATCCTTCATCATCATATTCTCGTATTATGAGGTTGAGAGAAGGAAATGTTGTTTTCAATTACAAGTATTACAATAATAAGATGTACAGAACAGAAGTAACAGAAGATTTCTGCTGTGCATTCTGCTTAGTAAAATGTGGAAGCTACAAGGGCTTGAGATATCACTTAAACTCATCACATGATCTTTTCCACTTTGACTTTTGGGCCACTGAAGAGATTCAAGCAGTAAATGTGTCTGTGAAAACTGATCACTGGAGATTTGAGATTGTTGCTGATGGTGTGGATCCTATGGAACAAACATTCACATTTTGCAAAAGACCTCTTCGAAGGAAGAGATCCAGAGACCAAGCATTTAAAGATGATAAACATGTGTGCCCTCTCCTTTTACGGTCTCCGTTCCCTGCACGAGGTGCTGAACATTGTGAGAAAATTGAAGGAGCTTCAAGTCCAACCGCGCAACAATGTGCTGATCCAGACTGTATTCCATCAACTTCAGGCAATATTCTTCCTCCACCTGTGATGCTCCCATTTGGCAAGATGAGAAAGTTGTCGGTTGAGCGTTCTGACTCAAGAAATGCTGCTCTCTTGCGGAAGCAACAATTTTATCACTCTCACAGAGCTCAGCCAATGGCATTTGACCAAGTAGTTTCAAATGAAGATAGTGAGGATGAAGTTGACGATGACGTTGCAGATCTTGAAGATCGCAGGATGCTCGATGATTTTGTTGATGTCACGAAAAATGAGAAGCAAATAATGCATATGTGGAACTCATTTGTGAGGAAGCAACGTGTGCTGGCAGATGGTCATATTCCATGGGCATGCGAGGCTTTCTCGAAATTGCATGGTCCTGATCTTGTTCGTGCACCTCCACTATTCTGGGGGTGGAGATTGTTAATGATCAAACTTTGGAATCATGGTCTCCTAGATGCTCAAACCATGGATGAATGCTCTCGTGTTCTTGATGGGATCAAAAATGAAATTGAAGATCCTAAAAGCTAA 1857 0.4141 MPGIPLVARETSYSRSTDQMCRQDSRVHLSAEEELAAEESLSVYCKPVELYNILQRRAVNNPSFLQRCLRYKIKEKHKRGIKMMISVSRINDEVLNMLPLYITVARLVPHVGVSEQCSVYRFKRIHTLTSNTAEGHTQIQANFCLPEVNKLATQATSQSLAILFFTCVKTLKSSATIDEGQCFLDVLAQSKEHYCLWGKIPLESLYRNWESLPNFIWGQRADFICTIDLLPCFLKSNHLNKNKCITIEAPCNPETMNISKRMQITICAQEFGARENSIYSTYTSHGNPSSSYSRIMRLREGNVVFNYKYYNNKMYRTEVTEDFCCAFCLVKCGSYKGLRYHLNSSHDLFHFDFWATEEIQAVNVSVKTDHWRFEIVADGVDPMEQTFTFCKRPLRRKRSRDQAFKDDKHVCPLLLRSPFPARGAEHCEKIEGASSPTAQQCADPDCIPSTSGNILPPPVMLPFGKMRKLSVERSDSRNAALLRKQQFYHSHRAQPMAFDQVVSNEDSEDEVDDDVADLEDRRMLDDFVDVTKNEKQIMHMWNSFVRKQRVLADGHIPWACEAFSKLHGPDLVRAPPLFWGWRLLMIKLWNHGLLDAQTMDECSRVLDGIKNEIEDPKS* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01668 618 Pfam VEFS-Box of polycomb protein 469 603 IPR019135 -
Pte5g01668 618 CDD VEFS-box_EMF2-like 482 609 - -
Pte5g01668 618 CDD ZnB-Zn_EMF2-like 273 371 - -
Pte5g01668 618 PANTHER POLYCOMB GROUP PROTEIN 28 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01668 Pte-Chr5 39105973 39129984 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01668 1 610 C2H2 Transcription Factor Family AT5G51230 53.605 0.0 625
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01668 - - qsa:O6P43_004854 744.962