Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01666 ATGGCATTTGACCAAGTAGTTTCAAATGAAGATAGTGAGGATGAAGTTGACGATGACGTTGCAGATCTTGAAGATCGCAGGATGCTCGATGATTTTGTTGATGTCACGAAAAATGAGAAGCAAATAATGCATATGTGGAACTCATTTGTGAGGAAGCAACGGTACTTCTCACTCATTATATATGACGTGCTGAGTGTGCTGGCAGATGGTCATATTCCATGGGCATGCGAGGCTTTCTCGAAATTGCATGGTCCTGATCTTGTTCGTGCACCTCCACTATTTCTGGTACTGATTCCTTTTGCATTGCTTGAATTTTTATCAACTGCATAA 330 0.4121 MAFDQVVSNEDSEDEVDDDVADLEDRRMLDDFVDVTKNEKQIMHMWNSFVRKQRYFSLIIYDVLSVLADGHIPWACEAFSKLHGPDLVRAPPLFLVLIPFALLEFLSTA* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01666 109 PANTHER POLYCOMB GROUP PROTEIN 1 94 - -
Pte5g01666 109 CDD VEFS-box_EMF2-like 1 100 - -
Pte5g01666 109 Pfam VEFS-Box of polycomb protein 1 97 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01666 Pte-Chr5 39080050 39082455 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01666 1 93 C2H2 Transcription Factor Family AT5G51230 74.194 3.02e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01666 - - qsa:O6P43_004854 127.102