Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01650 ATGGGGAATGTTTGTGTGGGTCCTAGTTTATCCAAAAATGGTTTCATCCAGTCTGTATCTGCGGCAATTTGGAGGTCTAAGTCTAATGGTGATTCAGTGTCTAACCATAGTAAAGGAGAAACAGTACTTGAGACAACACCTCAAGAACCTGAATCACCCTTGCCTGTCCAAAACAAACCTCCTGAACAAATAACTATGCCAAAGCCAGACGCCATCCCAGATGCCAAGCCAGACAGTGAAGCATTTATGGATGTTGTTGGGAGCCCATATTATGTTGCACCAGAGGTTCTTCGAAAGCGGTATGGTCCAGAAGCAGATGTCTGGAGTGCTGGGGTGATTCTTTACATTCTTTTAAGTGGTGTGCCTCCATTTTGGGCTGAAACTGAACAAGGAATATTTGAGCAAGTTTTGCATGGCGATCTTGACTTCTCATCTGACCCTTGGCCAAGTATCTCAGAAAGTGCCAAAGATTTAGTGAGAAAAATGCTTGTCCGAAATCCAAAAAGACGGCTCACTGCACATCAAGTTTTGTGTCATCCATGGATACAAGTTGATGGTGTAGCTCCAGACATGCCTCTAGATTCTGCTGTTCTTAGTCGGTTGAAACAATTCTCTGCGATGAATAAGCTTAAGAAAATGGCCCTTAGAGTCATTGCTGAGAGCTTATCGGAAGAAGAAATAGCTGGACTGAAGGAAATGTTCAAGATGATAGATACAGATAACAGTGGTCAAATCACTTTCGAAGAACTTAAAGCTGGTCTACAAAGAGTTGGGGCAAATCTTAAGGAGTCTGAAATCTATGATCTGATGCAAGCGGCGGATGTGGATAACAGTGGAACAATTGATTATTTGGAGTTTATAGCAGCGACACTGCATCTAAACAAGATTGAAAGGCAAGACCATTTATTTGCTGCCTTCTCTTATTTTGACAAGGATGGTAGTGGCTATATTACTCTTGATGAGCTCCAGCAAGCATGTGAAGAGTTTGGCATCAAAGATGTTCATTTGGAAGAGATGATGAGAGAAGTTGATCAAGATAATGATGGTCACATAGATTACAACGAGTTCGTCGCCATGATGCATAAAGGGCATGCTGGGGGGAAGGTTAAGGGTTTAGAACATAGCTTTAGCATTGGGTTCAGAGAGGCCTTAAAAATATAG 1161 0.4212 MGNVCVGPSLSKNGFIQSVSAAIWRSKSNGDSVSNHSKGETVLETTPQEPESPLPVQNKPPEQITMPKPDAIPDAKPDSEAFMDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLSGVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRNPKRRLTAHQVLCHPWIQVDGVAPDMPLDSAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLKEMFKMIDTDNSGQITFEELKAGLQRVGANLKESEIYDLMQAADVDNSGTIDYLEFIAATLHLNKIERQDHLFAAFSYFDKDGSGYITLDELQQACEEFGIKDVHLEEMMREVDQDNDGHIDYNEFVAMMHKGHAGGKVKGLEHSFSIGFREALKI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01650 386 SUPERFAMILY Protein kinase-like (PK-like) 80 204 IPR011009 -
Pte5g01650 386 ProSitePatterns EF-hand calcium-binding domain. 238 250 IPR018247 -
Pte5g01650 386 SMART efh_1 301 329 IPR002048 GO:0005509
Pte5g01650 386 SMART efh_1 265 293 IPR002048 GO:0005509
Pte5g01650 386 SMART efh_1 229 257 IPR002048 GO:0005509
Pte5g01650 386 SMART efh_1 335 363 IPR002048 GO:0005509
Pte5g01650 386 MobiDBLite consensus disorder prediction 27 52 - -
Pte5g01650 386 Gene3D Transferase(Phosphotransferase) domain 1 64 185 - -
Pte5g01650 386 ProSitePatterns EF-hand calcium-binding domain. 274 286 IPR018247 -
Pte5g01650 386 PANTHER SERINE/THREONINE-PROTEIN KINASE 73 356 - -
Pte5g01650 386 SMART serkin_6 18 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01650 386 FunFam Calcium-dependent protein kinase SK5 92 187 - -
Pte5g01650 386 ProSitePatterns EF-hand calcium-binding domain. 344 356 IPR018247 -
Pte5g01650 386 Gene3D - 189 364 - -
Pte5g01650 386 ProSitePatterns EF-hand calcium-binding domain. 310 322 IPR018247 -
Pte5g01650 386 ProSiteProfiles Protein kinase domain profile. 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01650 386 ProSiteProfiles EF-hand calcium-binding domain profile. 297 332 IPR002048 GO:0005509
Pte5g01650 386 FunFam Calcium-dependent protein kinase 1 190 364 - -
Pte5g01650 386 Pfam EF-hand domain pair 300 360 IPR002048 GO:0005509
Pte5g01650 386 Pfam EF-hand domain pair 230 290 IPR002048 GO:0005509
Pte5g01650 386 Pfam Protein kinase domain 80 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01650 386 ProSiteProfiles EF-hand calcium-binding domain profile. 225 260 IPR002048 GO:0005509
Pte5g01650 386 ProSiteProfiles EF-hand calcium-binding domain profile. 261 296 IPR002048 GO:0005509
Pte5g01650 386 MobiDBLite consensus disorder prediction 27 63 - -
Pte5g01650 386 SUPERFAMILY EF-hand 222 362 IPR011992 -
Pte5g01650 386 CDD EFh 301 361 IPR002048 GO:0005509
Pte5g01650 386 ProSiteProfiles EF-hand calcium-binding domain profile. 335 366 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01650 Pte-Chr5 38900115 38906941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01650 1 69 EF-hand Containing Proteins AT5G04870 56.338 1.09e-15 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte5g01650 Pkinase 4.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01650 K13412 - qsa:O6P43_008795 559.681