Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01646 ATGTTTGGGAGAGCTCCAAAGAAAAGTGACAACACAAAATACTACGAGATTCTTGGAGTATCAAAGAATGCTTCACAAGATGATCTCAAGAAAGCTTACAGGAAAGCCGCCATTAAGAACCATCCTGATAAGGGAGGTGACCCAGAAAAGTTTAAAGAGTTGGCCCAAGCATATGAGGTTTTAAGTGACCCTGAAAAACGAGAGATTTATGATCAATATGGTGAAGATGCTCTTAAAGAAGGAATGGGTGGTGGAGGAGGTGGCCATGATCCATTTGACATTTTCCAGTCCTTCTTTGGAGGCAGCCCCTTCGGTGGTGGAAGCAGCAGGGGTCGAAGACAGAGAAGGGGTGAAGATATTATCCATCCCCTTAAAGTATCTCTTGAAGATCTATATAATGGAACATCCAAGAAGCTCTCCCTTTCTCGAAATGTGATATGTTCAAAGTGCAAAGGAAAAGGTTCCAAGTCTGGTGCTTCAATGACATGCCCTGGCTGTCAGGGATCTGGTGTGAAGATCTCCATCAGACACCTTGGCCCTTCTATGATCCAGCAGGTGCAGCATGCTTGCAATGATTGCAAGGGCACTGGTGAGTCAATCAATGACAAGGACCGCTGCCCCCAGTGCAAGGGAGAGAAAGTTGTGCAAGAGAAGAAAGTGTTGGAAGTTATTGTTGAGAAAGGCATGCAAAATGGACAGAAGATTACATTTCCTGGAGAAGCTGATGAAGCTCCTGATACAATTTCAGGGGATATTGTATTTATTCTCCAACAAAAAGAGCATCCCAAATTTAAGCGAAAGGGCAACGACTTATTTGCTGAGCACACATTATCCCTCACAGAGTCGCTATGTGGATTCCAATTTATATTGACGCATTTGGATGGCAGGCAGCTCCTCATCAAATCCCAACCTGGGGAAGTAGTTAAACCAGACCAATTTAAAGCAATCAATGATGAAGGAATGCCGATGTATCTGCGGCCATTTATGAGGGGCAAATTGTACATCCATTTCTTTGTTGATTTCCCTGATTCATTTAGCCCAGAACAATGCAAGGCATTAGAGACTGTTCTCCCTCCAAGGTCTTCAGTGCAGCTGACAGACATGGAACTGGATGAGTGTGAAGAAACTACATTGAATGACGTGAACATGGAGGAGGAAATGCGTCGTAAGCAAGCACAGCAAGCACATGAAGCTTATGATGAGGATGAAGATATGCCCCATGGTGCTCAGAGGGTACAATGTGCTCAACAATGA 1254 0.4418 MFGRAPKKSDNTKYYEILGVSKNASQDDLKKAYRKAAIKNHPDKGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGGGGHDPFDIFQSFFGGSPFGGGSSRGRRQRRGEDIIHPLKVSLEDLYNGTSKKLSLSRNVICSKCKGKGSKSGASMTCPGCQGSGVKISIRHLGPSMIQQVQHACNDCKGTGESINDKDRCPQCKGEKVVQEKKVLEVIVEKGMQNGQKITFPGEADEAPDTISGDIVFILQQKEHPKFKRKGNDLFAEHTLSLTESLCGFQFILTHLDGRQLLIKSQPGEVVKPDQFKAINDEGMPMYLRPFMRGKLYIHFFVDFPDSFSPEQCKALETVLPPRSSVQLTDMELDECEETTLNDVNMEEEMRRKQAQQAHEAYDEDEDMPHGAQRVQCAQQ* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01646 417 CDD DnaJ 14 63 IPR001623 -
Pte5g01646 417 Pfam DnaJ central domain 147 213 IPR001305 GO:0031072|GO:0051082
Pte5g01646 417 Gene3D DnaJ domain 10 109 IPR036869 -
Pte5g01646 417 SUPERFAMILY HSP40/DnaJ peptide-binding domain 113 270 IPR008971 GO:0006457|GO:0051082
Pte5g01646 417 SUPERFAMILY HSP40/DnaJ peptide-binding domain 264 353 IPR008971 GO:0006457|GO:0051082
Pte5g01646 417 FunFam DnaJ subfamily A member 2 147 213 - -
Pte5g01646 417 Hamap Chaperone protein DnaJ [dnaJ]. 10 405 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Pte5g01646 417 ProSiteProfiles dnaJ domain profile. 13 74 IPR001623 -
Pte5g01646 417 CDD DnaJ_zf 147 213 IPR001305 GO:0031072|GO:0051082
Pte5g01646 417 Gene3D - 110 259 - -
Pte5g01646 417 CDD DnaJ_C 118 344 - -
Pte5g01646 417 PRINTS DnaJ domain signature 66 85 IPR001623 -
Pte5g01646 417 PRINTS DnaJ domain signature 46 66 IPR001623 -
Pte5g01646 417 PRINTS DnaJ domain signature 15 33 IPR001623 -
Pte5g01646 417 PANTHER DNAJ-LIKE-2, ISOFORM A-RELATED 11 398 IPR044713 GO:0006457|GO:0030544
Pte5g01646 417 SUPERFAMILY Chaperone J-domain 8 107 IPR036869 -
Pte5g01646 417 Gene3D - 147 213 - -
Pte5g01646 417 SMART dnaj_3 12 66 IPR001623 -
Pte5g01646 417 Pfam DnaJ C terminal domain 121 342 IPR002939 -
Pte5g01646 417 FunFam DnaJ subfamily A member 2 261 343 - -
Pte5g01646 417 FunFam dnaJ protein homolog 10 109 - -
Pte5g01646 417 ProSiteProfiles Zinc finger CR-type profile. 134 218 IPR001305 GO:0031072|GO:0051082
Pte5g01646 417 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 144 216 IPR036410 -
Pte5g01646 417 Coils Coil 382 402 - -
Pte5g01646 417 Pfam DnaJ domain 13 71 IPR001623 -
Pte5g01646 417 FunFam Chaperone protein dnaJ 3 214 254 - -
Pte5g01646 417 MobiDBLite consensus disorder prediction 383 408 - -
Pte5g01646 417 ProSitePatterns Nt-dnaJ domain signature. 51 70 IPR018253 -
Pte5g01646 417 Gene3D - 261 343 - -
Pte5g01646 417 MobiDBLite consensus disorder prediction 383 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01646 Pte-Chr5 38862244 38865168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01646 14 73 C2H2 Transcription Factor Family AT1G74250 44.928 4.44e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01646 K09503 - cit:102608938 712.99