Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01643 ATGGTTATAGCATTAGTTGGTGGCGATTCTCTGAGGGAAAGAGCAGCGAAGATGAGAGAGTCGTTGCACAAGAGTCAAACCATCACAGACAATGTTGTTTCGATTCTCGGTTCTTTCGATCATCGTCTCTCAGCTCTGGAGACCGCCATGCGTCCAACTCAGATCAGAACGCATTCTATCAGGAAAGCTCATGAGAATATTGATAAGACTTTAAAATCTGCGGAGGTTATATTGGCTCAATTCGATCTTTGTCATCAGGCTGAAGCAAAAATACTTAGAGGGCCTCATGAAGACTTGGAAACTTATCTACAAGCAATTGATCAGCTGAGAAGCATTATTGGATTTTTTAGCAACAGAAAAGGATATATGAGTAATGATGGTGTAGTCAATCATGCCAATACTTTACTTGTTAAAGCAATTTCTAAGTTAGAAGATGAATTGAAGCAACTACTAGCGTCTTACAGCAAACCGGTGGAGCCTGAGCGTCTTTTTGAAGGTCTACCAAATTCATTGCGTCCATCCACAGGGTCACCCGGACATGAGGGTGATTATCATAGCAAGCATATGCACAATCATTCTGAGCACCAAAACAATGGCACTGAAAATGTTGTTTATACGCCTCCCACCCTTATACCTCCACGCATTTTGCCACTTCTTCATGATTTAGCATTGCAAATGGTTCAAGCGGGTCATCAGCACCAATTGCTTAAAATTTATAGGGATAGTCGTTCTACTGTATTGGAAGAAAGCCTCCGAAAACTGGGAGTTGAGAAGCTTAGCAAAGAAGATGTTCAGAAGATGCAATGGGAGGTTTTGGAGGCCAAAATTGGGAACTGGATTCATTTTATGCGTATAGCTGTGAAGTTGTTGTTTGCTGGAGAACGGAAAGTTTGCGATCAGATGCTAGAAGGTTTTGATTCTCTCCGTGATCAGTGTTTTGCTGAGGTTACTGCAGGCAGTGTCTCAGTACTGCTTAGTTTTGGCGAGGCAATTGCCAGAAGTAAAAGATCACCTGAGAAGTTATTTGTCCTTCTAGACATGTATGAGATAATGCAGGAGCTGCACTTGGAGATTGAAACAACATTCAAAGGTAAACCATGCGCAGAAATTAGAGAATCGGCATTGGGATTGACAAAACGGCTTGCCCAAACTGCTCAAGAGACCTTTGGAGATTTTGAAGAAGCTGTTGAGAAGGATGCAACTAAAACTGCTGTCTCAGATGGAACTGTCCACCCTTTGACGAGTTATGTCATCAACTACGTGAAGTTCTTGTTCGACTATCGATCCACCTTGAAGCAACTTTTTCAAGCATTGGATAATGGAGATGACACTTCAAAGTTAGCATCTGTGACAATGCGCATTATGCAAGCTCTTCAAACAAATTTAGATGGGAAATCAAAGCAGTATAGGGATCCTTCATTGACTCACCTATTTCTCATGAACAATATTCATTATATTGTCAGATCTGTGCGCAGATCTGAAGCGAAAGATCTACTGGGTGATGATTGGGTCCAACGGCATAGAAGGATTGTTCAGCAGCATGCAAATCAATACAAAAGAAATGCATGGTCCAAGATTCTACAATGTCTGTCTGTTCAAGGCCTGACCTCTTCTGGTGGCGGCAGTGCAGTGGGAAGTGATGGAGGAAATAGTAGTGGCGTATCTAGAGCGGTTATCAAGGACAGGTTCAAGACATTCAATATTCAGTTTGAGGAGCTTCATCAGAAACAGTCGCAATGGACTGTACCTGATACAGAGTTACGGGAGTCTCTGAGGCTTGCTGTTGCAGAGGTTTTGTTGCCTGCTTATAGATCATACGTGAAACGTTTCGGTTCATTGGTTGAAAATGGGAAGAATCCACAGAAGTACATCAAATACACAGCAGAAGATCTAGAAAGAATGTTGAGTGAATTTTTTGAAGGAAAGAACATGACTGAAACCAGGCGGTAA 1950 0.42 MVIALVGGDSLRERAAKMRESLHKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKSAEVILAQFDLCHQAEAKILRGPHEDLETYLQAIDQLRSIIGFFSNRKGYMSNDGVVNHANTLLVKAISKLEDELKQLLASYSKPVEPERLFEGLPNSLRPSTGSPGHEGDYHSKHMHNHSEHQNNGTENVVYTPPTLIPPRILPLLHDLALQMVQAGHQHQLLKIYRDSRSTVLEESLRKLGVEKLSKEDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQMLEGFDSLRDQCFAEVTAGSVSVLLSFGEAIARSKRSPEKLFVLLDMYEIMQELHLEIETTFKGKPCAEIRESALGLTKRLAQTAQETFGDFEEAVEKDATKTAVSDGTVHPLTSYVINYVKFLFDYRSTLKQLFQALDNGDDTSKLASVTMRIMQALQTNLDGKSKQYRDPSLTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWSKILQCLSVQGLTSSGGGSAVGSDGGNSSGVSRAVIKDRFKTFNIQFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRSYVKRFGSLVENGKNPQKYIKYTAEDLERMLSEFFEGKNMTETRR* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01643 649 Gene3D Exocyst complex component Exo70 75 649 - -
Pte5g01643 649 Coils Coil 133 153 - -
Pte5g01643 649 MobiDBLite consensus disorder prediction 163 203 - -
Pte5g01643 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 641 IPR004140 GO:0000145|GO:0006887
Pte5g01643 649 MobiDBLite consensus disorder prediction 181 195 - -
Pte5g01643 649 Pfam Exo70 exocyst complex subunit 278 637 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pte5g01643 649 SUPERFAMILY Cullin repeat-like 77 640 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01643 Pte-Chr5 38830501 38843124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01643 9 650 EXO70 exocyst subunit family AT5G03540 75.934 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01643 K07195 - cit:102629699 1058.51