Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01622 ATGGGTTCAGAGGCTACTCTTCCAAGGTGGGCGTCTGAGCCATGCATCATGGGCATTGATGAAGCTGGCCGAGGCCCTGTCTTAGGACCCATGGTGTACGCATGTATGTACTGTGCTTGCTCATATCAGAGGACTCTTGCTTCTTTGGAGTTTGCAGATTCAAAAACGTTGAAGGAAGAAAGAAGAGAAGAATTATTTGAGACTATAAAGAATAATGAATCAATTGGATGGGCGGTTGATATCTTGGACCCAACGGAGCTTTCATCTAAAATGCTACAGAAAAACAAGATAAACCTAAATGAGATGTCACACAACTCTGCCATTGGCCTCATTGATAGGGTACTGAAAATGGGAGTTCTCCTGACTGAGGTCTATATAGATACTGTGGGAGATGCAGAGAAGTACCAACTAAAGCTGTCAACAATTTTTCCAGCTGTAAAATTTGTGGTTGCAAAGAAAGCTGATAGTTTATATCCAATTGTGAGTGGTGCAAGTATAATAGCCAAGGTGACAAGGGATCGAGCCTTACGAGATTGGATATTGGTTGAGAGTGCTGACAACCTGCATAGGAACTTTGGCTCTGGTTACCCTGGAGATCCTTTAACCAAGTCTTGGTTGGAAGATCACAAACATCCAGTGTTCGGATTCCCTACATTGGTGCGATTCAGCTGGGGAACGTGCACTCCTTTTTTCAAAGACATGGTTGAAGTTCAATGGGAAGCTGATAAAACGGATGAAAATGATTCTGGCACTAGCCGTGGAAAGCGGCAAATGAAACTGAGCAATGTGGGATTTACCATGTCAAAGACGAAGAGTGAAGAAATCGAATCAAGTGGTAAAGGGCGTTGCAGGTTCTTCCAAGCACGAAAACTTGAGCTACTCACTGAATTCTAA 894 0.4329 MGSEATLPRWASEPCIMGIDEAGRGPVLGPMVYACMYCACSYQRTLASLEFADSKTLKEERREELFETIKNNESIGWAVDILDPTELSSKMLQKNKINLNEMSHNSAIGLIDRVLKMGVLLTEVYIDTVGDAEKYQLKLSTIFPAVKFVVAKKADSLYPIVSGASIIAKVTRDRALRDWILVESADNLHRNFGSGYPGDPLTKSWLEDHKHPVFGFPTLVRFSWGTCTPFFKDMVEVQWEADKTDENDSGTSRGKRQMKLSNVGFTMSKTKSEEIESSGKGRCRFFQARKLELLTEF* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01622 297 Gene3D Ribonuclease hii. Domain 2 187 234 IPR023160 GO:0004523
Pte5g01622 297 FunFam Ribonuclease 188 235 - -
Pte5g01622 297 NCBIfam ribonuclease HII 16 228 IPR004649 GO:0004523|GO:0016070
Pte5g01622 297 SUPERFAMILY Ribonuclease H-like 15 232 IPR012337 -
Pte5g01622 297 Gene3D - 3 186 IPR036397 GO:0003676
Pte5g01622 297 ProSiteProfiles Ribonuclease (RNase) H type-2 domain profile. 14 236 IPR024567 GO:0004523
Pte5g01622 297 FunFam Ribonuclease 2 186 - -
Pte5g01622 297 Pfam Ribonuclease HII 17 227 IPR024567 GO:0004523
Pte5g01622 297 CDD RNase_HII_eukaryota_like 17 236 - -
Pte5g01622 297 PANTHER RIBONUCLEASE H2 SUBUNIT A 4 284 IPR001352 GO:0003723|GO:0004523
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01622 1 298 Core DNA Replication Machinery Family AT2G25100 64.430 2.88e-143 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01622 K10743 - qsa:O6P43_004883 509.605