Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01588 ATGTTGGTCATGGAGAAAGATTTTGATGATAAGTTGCAGATTCAAGGGAATTCTTCCAATGACAATGGTGGTGGTGCTGGTAGGAATGTGCAAAGATCCAAAAGCTTTGCCTTTAGGGCACCCCAAGAGAGTTTCACCATTCAAGACTTCGAATTGGGCAAGATTTATGGTGTTGGGTCTTATTCTAAGGTTGTAAGAGCCAAGAAGAAGGACTCAGGCGTTGTCTATGCATTGAAGATAATGGATAAAAAGTTTATAACAAAGGAGAACAAGACAGCTTATGTGAAGTTGGAGCGTATAGTGCTTGACCAATTGGACCATCCTGGCATTGTTCGGCTACTTTTTACATTCCAAGATACTTTTTCTTTGTATATGGCTCTCGAGTCCTGTGAAGGAGGAGAACTTTTTGACCAAATAACCAGGAAAGGTCGTTTGACAGAGGATGAAGCTCGATTCTATGCAGCTGAAGTGGTTGATGCATTGGAATACATACATAGTTTGGGATTGATACACCGTGATATTAAGCCAGAGAACTTACTGCTTACTGGTGATGGGCACATCAAAATAGCCGACTTTGGGAGTGTGAAGCCTTTACAGGATAGCTTAATCACATTGCTTCCTAATGCAGCATCAGATGATAAGGCATGCACATTTGTGGGAACTGCTGCTTATGTCCCTCCAGAAGTCCTAAATTCTTCTCCTGCAACTTTTGGCAATGACCTTTGGGCACTTGGATGTACAATATACCAAATGCTTTCAGGAACTTCTCCTTTCAAGGATGCAAGTGAATGGCTTATCTTCCAAAGAATCATAGCAAGAGATATAAAATTCCCTGATTACTTTTCTGAGGATGCAAGAGATCTTATTGACCGATTATTGGATTTAGATCCTAGCAAAAGACCTGGTGCAGGTCCTGATGGTTACGGTGTAATCAAAGAACATCCATTTTTCAAGGGGGTTGACTGGCAGAACCTTAGATCACAGACTCCACCAAAGCTTGCTCTAGAAGCAGGAGCACAATCAGGTGACGGTGATGAGTCATCTTGGAACCCTGTGCATGTCGGTGATTGTACTGCGATTCATACTGATTCCAATGCTTCATCTTCTGACGGGATTTATCATATAAACAGGCTTGCGTCTATTGATTCCTTTGATTCAAAATGGCAACAATTTTTGGATCCTGGAGAATCCGTTCTTATGATCTCAATGGTGAAGAAATTACAAAAGCTAACTAGCAAGAAGGTGCAACTCATTCTCACCAACAAGCCAAAATTGATCTATGTAGATCCTTCAAAGCTGGAGCTAAAGGGAAATATTATATGGTCTGATAACCCAAATGATCTCAGCATCCAAGTAGCAAGTGCCTCGAGTTTTAAGATATGCACTCCAAAAAAGGTGATGTCATTTGAGGATCCAAAACAAAGAGCATGGCTGTGGAAAAAAGCAATTGAGGGGCTTCAAAGCCAATGA 1470 0.4122 MLVMEKDFDDKLQIQGNSSNDNGGGAGRNVQRSKSFAFRAPQESFTIQDFELGKIYGVGSYSKVVRAKKKDSGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLLFTFQDTFSLYMALESCEGGELFDQITRKGRLTEDEARFYAAEVVDALEYIHSLGLIHRDIKPENLLLTGDGHIKIADFGSVKPLQDSLITLLPNAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTIYQMLSGTSPFKDASEWLIFQRIIARDIKFPDYFSEDARDLIDRLLDLDPSKRPGAGPDGYGVIKEHPFFKGVDWQNLRSQTPPKLALEAGAQSGDGDESSWNPVHVGDCTAIHTDSNASSSDGIYHINRLASIDSFDSKWQQFLDPGESVLMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLELKGNIIWSDNPNDLSIQVASASSFKICTPKKVMSFEDPKQRAWLWKKAIEGLQSQ* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01588 489 SUPERFAMILY Protein kinase-like (PK-like) 35 334 IPR011009 -
Pte5g01588 489 Gene3D - 359 489 IPR011993 -
Pte5g01588 489 Gene3D Transferase(Phosphotransferase) domain 1 134 329 - -
Pte5g01588 489 PANTHER SERINE/THREONINE-PROTEIN KINASE 35 331 - -
Pte5g01588 489 Pfam Protein kinase domain 52 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01588 489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 169 181 IPR008271 GO:0004672|GO:0006468
Pte5g01588 489 SUPERFAMILY PH domain-like 311 487 - -
Pte5g01588 489 ProSiteProfiles Protein kinase domain profile. 50 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01588 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 48 133 - -
Pte5g01588 489 CDD STKc_PDK1 48 317 IPR039046 GO:0004674
Pte5g01588 489 Pfam PH domain 386 488 IPR033931 -
Pte5g01588 489 FunFam 3-phosphoinositide-dependent protein kinase 1 360 489 - -
Pte5g01588 489 FunFam 3-phosphoinositide-dependent protein kinase 2-like 134 332 - -
Pte5g01588 489 Gene3D Phosphorylase Kinase; domain 1 48 133 - -
Pte5g01588 489 SMART serkin_6 50 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01588 489 MobiDBLite consensus disorder prediction 13 30 - -
Pte5g01588 489 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01588 Pte-Chr5 38325332 38333625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01588 1 490 AGC Kinase Gene Family AT3G10540 80.081 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Pte5g01588 Pkinase 1.8e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01588 K06276 - qsa:O6P43_004956 828.55