Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte5g01562 | ATGAAGTGTTTCCATCTCTCCAAGAAAGGAAAACATGCTGAACCAAAAATCACAAAGTCACTATCTTTATGTTCCTCAACTTCAACATCTATGCCAACTGATCGTGACACAAAGCAAACAGACGCTGATTTCAGTTCTCAGAATGTCTCAGAGTTTAGCACTGACTCCTCTGCCAAGTCCTTCATAATGCTGTCTCATATAAAGGGAAATCTAAGAGAATACACATTCTCAGAATTGAAGGCAGCAACAAAAAATTTTAGCCTCTCACTTATGGTTGGAGAAGGTGGATTTGGTGGTGTATATAGGGGTATCATCCATAGCCCTGAAGATTCAAATAAGAAAATTCATATTGCTGTCAAACAGCTCAGCAGAAGAGGATTGCAGGCAAGTTTTCTTGTTACCTATTCTTACTATGGCCACAAAGAATGGGTTACAGAAGTAAATGTTCTAGGGGTAGTTGAACACCCAAACCTTGTCCAGCTTTTGGGTTACTGTGCTGAGGATGATGTAAGAGGCATCCAGAGGCTATTGGTGTATGAATATATGCATAATAGGAGTGTTCTAGATCACCTGTCAAGTCGTTCTCAGAAAACTCTTCCATGGTCCACAAGAATGAAAGTAGCTCAGGATACTGCCCGAGGCTTAGCATACCTCCACGAAGGAATGGATTTTCAGATAATCGTTAGAGATTTCAAGTCCTCAAATATACTTTTAGACGAGGAATGGAATGCAAAATTATCAGATTTCGGGTTGGCTAGGCTGGGACCTTCAGATGGACTGAGTCACGTCTCTACAGCGGTTGTAGGAACTATTGGATATGCTGCTCCTGAGTACATTCAAACCGGTCATCTCACATCAAAAAGTGATGTGTGGAGTTATGGTGTTTTCATCTATGAACTCATCACAGGCAGACGCCCTTTGGAGCGAAGTCGCCCCAAGAATGAGCAAAATCTTTTAGAATATGTTAGATCACACCTCTCTGACACAAAAAGGTTTCACATGATTTTGGATCCAAGGCTTGAAGGAAATTTTTGTCTCAAGTCTGCACAAAAACTAGCAGCAGTAGCTAACCGTTGCCTGGTGAGACAACCTAAGTCACGTCCGAAGATGAGTCAAGTGTTGGAGATGATCAACAGAATTGTAGATTCAACAGATTTAGGGACCCCCCAGCTCCAAATGGAATATTCAGCTTCAGATTATTATGACACCAAAAAATCCATAAAACAACGGTTCAAGATGTTTCTGGACACGGTTAGTGCTGACAAAGGGTGTTTAACTTGGGATACATCAAGACTAAAGCTTGTGGGACATGTTAACTAA | 1320 | 0.4121 | MKCFHLSKKGKHAEPKITKSLSLCSSTSTSMPTDRDTKQTDADFSSQNVSEFSTDSSAKSFIMLSHIKGNLREYTFSELKAATKNFSLSLMVGEGGFGGVYRGIIHSPEDSNKKIHIAVKQLSRRGLQASFLVTYSYYGHKEWVTEVNVLGVVEHPNLVQLLGYCAEDDVRGIQRLLVYEYMHNRSVLDHLSSRSQKTLPWSTRMKVAQDTARGLAYLHEGMDFQIIVRDFKSSNILLDEEWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGHLTSKSDVWSYGVFIYELITGRRPLERSRPKNEQNLLEYVRSHLSDTKRFHMILDPRLEGNFCLKSAQKLAAVANRCLVRQPKSRPKMSQVLEMINRIVDSTDLGTPQLQMEYSASDYYDTKKSIKQRFKMFLDTVSADKGCLTWDTSRLKLVGHVN* | 440 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte5g01562 | 439 | CDD | STKc_IRAK | 92 | 380 | - | - | |
Pte5g01562 | 439 | ProSiteProfiles | Protein kinase domain profile. | 86 | 381 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pte5g01562 | 439 | PANTHER | OS01G0588500 PROTEIN-RELATED | 45 | 379 | - | - | |
Pte5g01562 | 439 | MobiDBLite | consensus disorder prediction | 24 | 46 | - | - | |
Pte5g01562 | 439 | SUPERFAMILY | Protein kinase-like (PK-like) | 61 | 377 | IPR011009 | - | |
Pte5g01562 | 439 | ProSitePatterns | Protein kinases ATP-binding region signature. | 92 | 120 | IPR017441 | GO:0005524 | |
Pte5g01562 | 439 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 181 | - | - | |
Pte5g01562 | 439 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 182 | 388 | - | - | |
Pte5g01562 | 439 | Gene3D | Transferase(Phosphotransferase) domain 1 | 182 | 402 | - | - | |
Pte5g01562 | 439 | Pfam | Protein tyrosine and serine/threonine kinase | 90 | 376 | IPR001245 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte5g01562 | Pte-Chr5 | 38061248 | 38063434 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte5g01562 | 74 | 385 | Glycoside Hydrolase | AT3G07070 | 46.178 | 2.12e-88 | 273 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Pte5g01562 | PK_Tyr_Ser-Thr | 2.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte5g01562 | - | - | qsa:O6P43_005017 | 608.601 |