Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01562 ATGAAGTGTTTCCATCTCTCCAAGAAAGGAAAACATGCTGAACCAAAAATCACAAAGTCACTATCTTTATGTTCCTCAACTTCAACATCTATGCCAACTGATCGTGACACAAAGCAAACAGACGCTGATTTCAGTTCTCAGAATGTCTCAGAGTTTAGCACTGACTCCTCTGCCAAGTCCTTCATAATGCTGTCTCATATAAAGGGAAATCTAAGAGAATACACATTCTCAGAATTGAAGGCAGCAACAAAAAATTTTAGCCTCTCACTTATGGTTGGAGAAGGTGGATTTGGTGGTGTATATAGGGGTATCATCCATAGCCCTGAAGATTCAAATAAGAAAATTCATATTGCTGTCAAACAGCTCAGCAGAAGAGGATTGCAGGCAAGTTTTCTTGTTACCTATTCTTACTATGGCCACAAAGAATGGGTTACAGAAGTAAATGTTCTAGGGGTAGTTGAACACCCAAACCTTGTCCAGCTTTTGGGTTACTGTGCTGAGGATGATGTAAGAGGCATCCAGAGGCTATTGGTGTATGAATATATGCATAATAGGAGTGTTCTAGATCACCTGTCAAGTCGTTCTCAGAAAACTCTTCCATGGTCCACAAGAATGAAAGTAGCTCAGGATACTGCCCGAGGCTTAGCATACCTCCACGAAGGAATGGATTTTCAGATAATCGTTAGAGATTTCAAGTCCTCAAATATACTTTTAGACGAGGAATGGAATGCAAAATTATCAGATTTCGGGTTGGCTAGGCTGGGACCTTCAGATGGACTGAGTCACGTCTCTACAGCGGTTGTAGGAACTATTGGATATGCTGCTCCTGAGTACATTCAAACCGGTCATCTCACATCAAAAAGTGATGTGTGGAGTTATGGTGTTTTCATCTATGAACTCATCACAGGCAGACGCCCTTTGGAGCGAAGTCGCCCCAAGAATGAGCAAAATCTTTTAGAATATGTTAGATCACACCTCTCTGACACAAAAAGGTTTCACATGATTTTGGATCCAAGGCTTGAAGGAAATTTTTGTCTCAAGTCTGCACAAAAACTAGCAGCAGTAGCTAACCGTTGCCTGGTGAGACAACCTAAGTCACGTCCGAAGATGAGTCAAGTGTTGGAGATGATCAACAGAATTGTAGATTCAACAGATTTAGGGACCCCCCAGCTCCAAATGGAATATTCAGCTTCAGATTATTATGACACCAAAAAATCCATAAAACAACGGTTCAAGATGTTTCTGGACACGGTTAGTGCTGACAAAGGGTGTTTAACTTGGGATACATCAAGACTAAAGCTTGTGGGACATGTTAACTAA 1320 0.4121 MKCFHLSKKGKHAEPKITKSLSLCSSTSTSMPTDRDTKQTDADFSSQNVSEFSTDSSAKSFIMLSHIKGNLREYTFSELKAATKNFSLSLMVGEGGFGGVYRGIIHSPEDSNKKIHIAVKQLSRRGLQASFLVTYSYYGHKEWVTEVNVLGVVEHPNLVQLLGYCAEDDVRGIQRLLVYEYMHNRSVLDHLSSRSQKTLPWSTRMKVAQDTARGLAYLHEGMDFQIIVRDFKSSNILLDEEWNAKLSDFGLARLGPSDGLSHVSTAVVGTIGYAAPEYIQTGHLTSKSDVWSYGVFIYELITGRRPLERSRPKNEQNLLEYVRSHLSDTKRFHMILDPRLEGNFCLKSAQKLAAVANRCLVRQPKSRPKMSQVLEMINRIVDSTDLGTPQLQMEYSASDYYDTKKSIKQRFKMFLDTVSADKGCLTWDTSRLKLVGHVN* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01562 439 CDD STKc_IRAK 92 380 - -
Pte5g01562 439 ProSiteProfiles Protein kinase domain profile. 86 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01562 439 PANTHER OS01G0588500 PROTEIN-RELATED 45 379 - -
Pte5g01562 439 MobiDBLite consensus disorder prediction 24 46 - -
Pte5g01562 439 SUPERFAMILY Protein kinase-like (PK-like) 61 377 IPR011009 -
Pte5g01562 439 ProSitePatterns Protein kinases ATP-binding region signature. 92 120 IPR017441 GO:0005524
Pte5g01562 439 Gene3D Phosphorylase Kinase; domain 1 44 181 - -
Pte5g01562 439 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 182 388 - -
Pte5g01562 439 Gene3D Transferase(Phosphotransferase) domain 1 182 402 - -
Pte5g01562 439 Pfam Protein tyrosine and serine/threonine kinase 90 376 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01562 Pte-Chr5 38061248 38063434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01562 74 385 Glycoside Hydrolase AT3G07070 46.178 2.12e-88 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte5g01562 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01562 - - qsa:O6P43_005017 608.601