Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01561 ATGGTCAGAAAGAGCTTCAAGTGCATGGAGCTCAGTTTTGAATACAGCGGAATGCTATGGCTTCCCATGCTACTATTGTGCTCAATGATACTAACAGTGCAGTGTCAGAATATCAGGGACTATGATGGCATCATCAATTCTTCCATTTCTGATATTACACAGCTTGCATATAGCCGCCTTACCAATATGACTTTCGCTGTTAATCAACAACTCGTTGAAAAGTCAACCTTCTGTGTTAATGACCCAGATGATGACTGGAACAGAGCATTCAACTTCTCATCTAATTTGGAATTCTTGTCTTCTTGCATTGAGGAGACTAGAGGAGATTTTGCCGGACGGCTGTGTACAGCTGCTGAAATAAAGTTTTATTTTGACAGTCTGCTTGAAAAAACAGGCAATGGAAACAATGCCAATTACTTGAAGCCTAACAGGAACTGTAATTTGACCAACTGGATTGATGGCTGTGAACCAGGTTGGGCCTGTAGTGATGGACTTAAGTTGCGATTGGACTTTGACTTTCAAAATTCACAGGTCATACCTGAAAGAACTTCAAACTGTCAAGCCTGCTGTGAGGGCTTCTTCTGTCCTCATGGTATTACTTGTATGATACCCTGTCCATTGGGAGCTTATTGTCCTTCTGCAACACTCAACTCAGCGACGGGTGTCTGTGAACCATACCTTTACCAACTTCCACCTGGAAAGCCAAACCACACATGTGGTGGTGCAAATATTTGGGCTGCTGCAAGTATGAACGATAACATTTTTTGTCCGTCTGGATCATATTGCCCTACAACTACAGAAAAAATTACATGTGGAGAAGGTTTAATTTTTGGATCGCATGTGACCCTTTTTGCCAAATATCTTGCAGAATGCTTCAGGTTGAATTCATGTGATACCAATACTTCAAAGCAAAATATCCATTTGTACGGAGCTATGCTTATTGCTGCTCTGAGTGGTCTACTTCTCTTAATATACAACTGTTCAGACCAAGTCCTGACCATTAGGGAAAGGCGGCTTGCAAAATCCAGAGAAAGAGCTGCTAGGATTGCAAGGGAGACTGCACAAGCACGCCAAAGATGGAGAGCTGCGAGAGACGCTGTCACGAATCAATCTGGGGCGCTGCAAGCTCAATTTTCCCATACATTCACGCGGAAGTCATATTCTGAAAGAGATGTTGATCAGTCATCGCCATTAAGACACAATGCATCAATCCCAGGTGTACCTTCATCTTCATCTCCCATGGTGAAGGGAAATCATAAGGAACCTGTTGAACTCATGAGGGTGATTCGTGAAGTTGACGATGGCCACTGTATCACTGACGAGGAGAATATTTTATCTGAGGTGAAGAGTCCTACAAGGGATGCAGAAATCCCAAAGAAGAAACTGCAGTCTCATAGTCAAATCTTCAGATATGCTTATTCTGAACTTGAGAAAGAGAATGCTCAACAGCATGATATTAAAGGCCTGACTTTCTCAGGCGTAATTAAAATGACCACTGACACTCGTAGAAAGAAAAGGCCTCTAATGGAGATAGCCTTCAAAGATTTGACTCTATCACTGCAAGCAAAAAAAAAGAATTTGTTAAGATGTGTTACTGGGACAATTAAACCTGGCCGCATTACTGCGGTTATGGGTCCATCAGGTGCTGGGAAAACTACATTACTTTCTGCAATAGCAGGAAAAGTTTTTGGTTGCAGAATGACTGGTTCCATCCTGATCAATGGAAAGAATGACTCTATTCAGTCTTACAAGAAAATTATTGGGTTTGTGCCACAAGATGATATAGTTCATGGAAACTTGACGGTAGAAGAGAATCTTTGGTTCAGTGCCAAGTGCCGGCTATCTGCTGGCTTACTGAAACCAGATAAAGTTCTAATTGTGGAGAGAGTCATTCAATCATTGGGGCTTCAAGCAGTAAGAGACTCCTTGGTCGGGACAGTGGAAAAGAGAGGAATCTCTGGAGGCCAAAGAAAGCGAGTAAATGTGGGAATAGAAATGGTCATGGAACCTTCACTTTTAATTTTGGATGAACCAACGTCTGGTTTAGACAGTGCATCATCACAGTTGCTTCTTAGAGCACTCAGACGCGAAGCACTTGAGGGAGTGAATATCTGTCTGGTGGTTCACCAACCAAGCTATGCATTGTTCAAGATGTTCGATGATTTGATACTTTTGGCTAAAGGAGGTCTTGTGGTCTATCATGGATCAGTCAACAAGGTTGAGGAGTACTTTGCTGGCATTGGTATTAATGTCCCAGAGCGCGTTAACCCTCCAGACTATTTCATTGACATTTTGGAGGGCATAGTGGTACCTGGTGGATGCTTGACTAGCAAGGATCTTCCTGTCAGGTGGATGCTTTACAAGGGGTACCCTGTACCTCCTGACATGCGCAACGATGGAGATTCAATATCTTCTGCTGGCATACATCAGAATAACATGATGATTCATAGTGAAAGTGACATTGGTCAAACTTTTGCTGGAGAATTGTGGCAAGATGTGGTGACAAATGTGGAGACACAAAAAGACGAGCTCCGGTTTAAATTTCTGAAGTCGAAGGACTTGTCAAACAGAAGAACTCCTGGCATAATCATGCAATATTGGTACTTCCTATCCAGAGTTAGCAAGCAGAGATTGAGGGAAGCAAAAACCGAAGCAGTAGACTATCTAATATTGTTGCTTGCAGGAGCTTGCTTGGGATCATTATCTAAAATGAGCGATGGGAATATGGGGGCAACAGCATACATTCACACCGTAATAGCAGTTTCTCTTCTATGTAAAATAGCAGCTCTGAGGTCATTCTCCCAAGATAAACTGCAGTTCTGGAGGGAAAGAAATTCTGGGATGAGCAGCTTGGCTTATTTTCTCTCCAAGGATACACTTGATCATTTTAATACTGTGATCAAGCCTGTGGTTTATCTCTCCATGTTCTATTTCTTCACCAACCCAAGATCTACTTTCACAGAGAATTATACAGTCCTCCTCTGCCTTGTATATTGTGTAACTGGCATAGGTTACGCATTTGCAATCCTATTTGCGCCTGGTGCAGCCCAGCTTTGGTCAGTACTTATTCCTGTTGTTTTGACACTCATTTCCACACAAACAAACAACAACAAATTCCTGAGGTATATAGCTGATTTGTGCTATCCTAAGTGGGCTCTGGAAGCATTTGTAATTGCCAATGCTAAAAGGTATTATGGAGTGTGGCTAATAACTCGTTGTGGAGTGCTTGCAAAAAGTGGGTACAACGTTCATGATTGGACTTTGTGTGTATCTGTTCTCATCCTCATAGGTGTAGTTAGTCGTGCCGTAGCATTCTCCTCTATTTTGATATTCCACAAGAAGTAA 3345 0.4224 MVRKSFKCMELSFEYSGMLWLPMLLLCSMILTVQCQNIRDYDGIINSSISDITQLAYSRLTNMTFAVNQQLVEKSTFCVNDPDDDWNRAFNFSSNLEFLSSCIEETRGDFAGRLCTAAEIKFYFDSLLEKTGNGNNANYLKPNRNCNLTNWIDGCEPGWACSDGLKLRLDFDFQNSQVIPERTSNCQACCEGFFCPHGITCMIPCPLGAYCPSATLNSATGVCEPYLYQLPPGKPNHTCGGANIWAAASMNDNIFCPSGSYCPTTTEKITCGEGLIFGSHVTLFAKYLAECFRLNSCDTNTSKQNIHLYGAMLIAALSGLLLLIYNCSDQVLTIRERRLAKSRERAARIARETAQARQRWRAARDAVTNQSGALQAQFSHTFTRKSYSERDVDQSSPLRHNASIPGVPSSSSPMVKGNHKEPVELMRVIREVDDGHCITDEENILSEVKSPTRDAEIPKKKLQSHSQIFRYAYSELEKENAQQHDIKGLTFSGVIKMTTDTRRKKRPLMEIAFKDLTLSLQAKKKNLLRCVTGTIKPGRITAVMGPSGAGKTTLLSAIAGKVFGCRMTGSILINGKNDSIQSYKKIIGFVPQDDIVHGNLTVEENLWFSAKCRLSAGLLKPDKVLIVERVIQSLGLQAVRDSLVGTVEKRGISGGQRKRVNVGIEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICLVVHQPSYALFKMFDDLILLAKGGLVVYHGSVNKVEEYFAGIGINVPERVNPPDYFIDILEGIVVPGGCLTSKDLPVRWMLYKGYPVPPDMRNDGDSISSAGIHQNNMMIHSESDIGQTFAGELWQDVVTNVETQKDELRFKFLKSKDLSNRRTPGIIMQYWYFLSRVSKQRLREAKTEAVDYLILLLAGACLGSLSKMSDGNMGATAYIHTVIAVSLLCKIAALRSFSQDKLQFWRERNSGMSSLAYFLSKDTLDHFNTVIKPVVYLSMFYFFTNPRSTFTENYTVLLCLVYCVTGIGYAFAILFAPGAAQLWSVLIPVVLTLISTQTNNNKFLRYIADLCYPKWALEAFVIANAKRYYGVWLITRCGVLAKSGYNVHDWTLCVSVLILIGVVSRAVAFSSILIFHKK* 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01561 1114 ProSitePatterns ABC transporters family signature. 652 666 IPR017871 GO:0005524|GO:0016887
Pte5g01561 1114 Pfam ABC-2 type transporter 709 1114 IPR043926 GO:0140359
Pte5g01561 1114 SMART AAA_5 537 738 IPR003593 GO:0016887
Pte5g01561 1114 MobiDBLite consensus disorder prediction 385 417 - -
Pte5g01561 1114 MobiDBLite consensus disorder prediction 397 416 - -
Pte5g01561 1114 CDD ABCG_EPDR 509 735 - -
Pte5g01561 1114 Gene3D - 498 747 IPR027417 -
Pte5g01561 1114 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 511 753 IPR003439 GO:0005524
Pte5g01561 1114 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 477 1101 - -
Pte5g01561 1114 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 511 733 IPR027417 -
Pte5g01561 1114 Pfam ABC transporter 530 680 IPR003439 GO:0005524
Pte5g01561 1114 FunFam ABC transporter G family member 24 505 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01561 Pte-Chr5 38047851 38054891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01561 506 712 Calmodulin-binding Proteins AT2G36910 28.302 3.41e-14 75.9