Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01555 ATGTTAGTTAGGATCAACACCCTTCTTCAGGGATACTCTGGCATAAGATTTGAGATATTAGAAGCCTTATCCAAGTTACTCAATAACAATATCACTCCATGTTTGCCACTCAGAGGCACAATCACAGCCTCTGGTGACTTGGTCCCTCTATCCTATATTGCTGGCTTATTAATTGGTAGGCCAAATTCTAAATCTGTTGGACCTAATGGACAGCCCCTTAGTGCCACGGAGGCTTTCCAACTAGCAGGAATTGATTGTGGATTCTTTGAGTTGCAACCGAAAGAGGGGTTAGCATTAGTCAATGGCACTGCAGTTGGTTCTGGCTTGGCTTCTATGGTTCTTTTTGAGGCTAACATACTTGCTGTTCTCTCTGAAATTATTTCAGCAATTTTTGCTGAGGTTATGCAAGGAAAACCAGAATTTACGGACCACTTGACACACAAGTTGAAGCACCACCCCGGCCAGATTGAGGCTGCAGCTATAATGGAACATATCTTAGATGGTAGCTCTTACATTAAGGCAGCAAAGAAGTTGCATGAAATGGATCCTCTACAGAAGCCTAAGCAAGACAGGTATGCACTTAGAACATCTCCTCAATGGCTTGGACCACAGATTGAAGTAATCCGGTCTGCAACAAAAATGATTGAGAGGGAGATTAACTCTGTGAATGATAACCCGTTGATTGATGTTTCAAGGAATAAGGCTCTTCATGGAGGAAATTTTCAAGGAACCCCAATCGGTGTTTCCATGGATAACACCCGTTTAGCCCTTGCTTCCATTGGCAAACTTTTGGAGGAGCTGGGGACATCATTGCTGGCAGGAGAGAAAGTTCGATCACCTGGAGAAGAATGTGACAAAGTTTTCTCTGCATTGTGTGCTGGAAAGTTGATTGATCCAATTCTGGATTGTCTGAAGGAGTGGAATGGTGCTCCTCTTCCAATATGTTAG 948 0.4325 MLVRINTLLQGYSGIRFEILEALSKLLNNNITPCLPLRGTITASGDLVPLSYIAGLLIGRPNSKSVGPNGQPLSATEAFQLAGIDCGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEIISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLEELGTSLLAGEKVRSPGEECDKVFSALCAGKLIDPILDCLKEWNGAPLPIC* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01555 315 Gene3D - 1 103 IPR024083 -
Pte5g01555 315 CDD PAL-HAL 1 265 IPR001106 -
Pte5g01555 315 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 39 55 IPR022313 GO:0016841
Pte5g01555 315 Gene3D Fumarase/aspartase (Central domain) 268 315 - -
Pte5g01555 315 PANTHER HISTIDINE AMMONIA-LYASE 265 315 IPR001106 -
Pte5g01555 315 SUPERFAMILY L-aspartase-like 265 315 IPR008948 GO:0003824
Pte5g01555 315 Gene3D Fumarase/aspartase (Central domain) 104 267 - -
Pte5g01555 315 Pfam Aromatic amino acid lyase 1 272 IPR001106 -
Pte5g01555 315 SUPERFAMILY L-aspartase-like 1 265 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01555 Pte-Chr5 37983334 37985007 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01555 265 316 Monolignol Biosynthesis Gene Families AT3G10340 73.077 1.12e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01555 K10775 - sly:101249824 488.034