Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01540 ATGGCTGCTTTCACTTCCCAAGCTTTTGTTCTCTCAGTCATCCTCTTCTTTCTCTCTCCCTTATCAAAAGCTAAGGATATCCTGGTAGGGGACTCCGTCAACGGGTGGCAAATACCAACTACAGACCCCGATGCTTTGAATGACTGGACTGAGAAGAACAGTTTTGACGCCGGGGATTTTCTTGTGTGGAATTTTGAGAATGGGGACTCAGCGTTGGAAGTGAAGCAGGAAGATTATCAAAACTGCAACACAACCTATCCAATCGCCCGATACGAAGGTGTGAACAACAGGGCACTGCTGTACCGGAATGGGTCTTTCTTCTACATCAGTGGAAGCCAGGGTCATTGTCAGATGGGTGAAAGGCTTAACATTCAAGTTCGCCCGTCTCAAGTACATGTTGCTACTCTCTACTCGTCTAGAGGTTGCACCGTGGGTCCGCCAGGACTCACAACCGTGGCTGGTCTTCTGTTGCTTACAGTACTGGGAATGATGGGTATGATCAGGTTGTACTGA 513 0.4834 MAAFTSQAFVLSVILFFLSPLSKAKDILVGDSVNGWQIPTTDPDALNDWTEKNSFDAGDFLVWNFENGDSALEVKQEDYQNCNTTYPIARYEGVNNRALLYRNGSFFYISGSQGHCQMGERLNIQVRPSQVHVATLYSSRGCTVGPPGLTTVAGLLLLTVLGMMGMIRLY* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01540 170 Gene3D - 23 132 IPR008972 -
Pte5g01540 170 SUPERFAMILY Cupredoxins 24 126 IPR008972 -
Pte5g01540 170 ProSiteProfiles Phytocyanin domain profile. 25 128 IPR003245 GO:0009055
Pte5g01540 170 PANTHER BLUE COPPER PROTEIN 26 128 IPR039391 GO:0009055
Pte5g01540 170 Pfam Plastocyanin-like domain 36 119 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01540 Pte-Chr5 37754491 37755359 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01540 13 130 Phytocyanin Superfamily AT5G25090 42.017 3.34e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01540 - - qsa:O6P43_015772 118.242