Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01538 ATGCTTCCTATATATCGAGAACTGATTAATGCAGGATTGAAGATTTGGTTATTCAGTGGAGACACTGATTCTGTGGTTCCCTTGACTGCAACTCGCTATTCTCTTGATGCGCTGAACCTGACAACCATCGTAAATTGGTACCCCTGGTATGACAATGGAAAGGTTGGGGGTTGGAGCCAAGTCTACAGAGAAGTTACATATGTAACAATATTGGGAGCAGGACATGAGGTTCCCCTTCATCGTCCCCGCGAGGCATACATTCTTTTCAGATCATTCCTGGAAAACAAAGCTATGCCAAGTGCATTGCAAAGATTGAATAAGGGAAGCATTACTCATGAGCTCTTATCCGTTCCTCCCTTGAGAAATGCTGTTTCACAATATTAG 384 0.4323 MLPIYRELINAGLKIWLFSGDTDSVVPLTATRYSLDALNLTTIVNWYPWYDNGKVGGWSQVYREVTYVTILGAGHEVPLHRPREAYILFRSFLENKAMPSALQRLNKGSITHELLSVPPLRNAVSQY* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01538 127 SUPERFAMILY alpha/beta-Hydrolases 1 100 IPR029058 -
Pte5g01538 127 Gene3D - 1 94 - -
Pte5g01538 127 FunFam Carboxypeptidase 1 95 - -
Pte5g01538 127 ProSitePatterns Serine carboxypeptidases, histidine active site. 65 82 IPR033124 GO:0004185
Pte5g01538 127 Pfam Serine carboxypeptidase 1 95 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01538 Pte-Chr5 37736666 37738239 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01538 12 98 Calmodulin-binding Proteins AT2G22960 32.955 2.06e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01538 K16297 - mnt:112092209 190.274