Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01524 ATGGGGAAGAGGAGTTGGTTTTTTGCTGTAAAGAAAGTTCTAAGTCCAGACTCCAAGGAGAAGAAGGATCAGTTGGCAAAGCAAAGCAGCAGTAAATCAAAGAAGAAATGGTTTGGCAAAAGCAAGCACTCTAGTCAAATATTTTTATCTGATAAGGAGGTGGCATCGGCGGTTCCTCCCCCTCTTACAAGAATAGTGGATGCTAAACTGATTGAGGCAGAAAATGAGCAAAGCAAGCATGCTTATTCTGTTGCACTTGCCACTGCCGTTGCTGCTGAAGCTGCTGTTGCAGCTGTTCAGGCTGCTGCAGAGGTCGTCCGTCTCACTTCGGTGTCTCGTATTACTGGAAAGTCAAGTGAAGAAATAGCAGCGATCAGGATTCAGGCAGCTTTTAGAGGATATATGGCAAGAAGAGCATTACGGGCCTTGAAAGGTTTAGTGAGGTTAAAAACCCTGATACAAGGGCAATCTGTTCAAAGGCAAGCTTTAACAACACTCAAATGCATGCACACGCTTTCTCGGCTCCAATCTCAGATTCGTGCTAGAAGGATTAGAATGTCTGAGGAAAATCAAGCTCTCCAGAGTCAACTTCAGCAGAAACGAGAAAAAGAACATGAGAAGTCGCAAACTTCTGTTGACAAGGTTGACGATTGGAACCATAGCCCCGGATCAAGGGAGCTCGTGGAAAAGAAGATCCTCAGCAAGCAAGAAGCTTCCATTCGAAGAGAAAGAGCTTTGGCCTATGCATACTCACATCAGCAAATGTGGAAGAATGCTTCAAAATCTGCAAATCCAAAATTTATGGATCCGAACAACCCTCATTGGGGTTGGAGTTGGCTTGAAAGATGGATGGCAGCCCGATCGTGGGAGAATCGAAGCACGACTTATAATAACGACCATGCCTCTGTAAGGAGTGGAGCAACAAGTCACACCCCTTTTGTTGGAGAAATCAGTATATCAAATTCTCTTCGTGAAAAGCCTTCCCCCGCTGGCAAAAAATCGAGCCAACCACCCAGTCGCCGTCAATCATCGCCATCTGTGCCTTCAAAGGCTCCATCTTCATCATCTACTGCTGAAAAAACAAAGCCTCCAAGTCCAAAAGGCAGTAGTAGTATATGGGGTGGTGATGCTGACTCGAGGAGTATGTTCAGTATACAGTCAGAACGCTACAGGAGGCATAGCGTAGGAGGGTCGTCTGCGAGAGATGACGAGAGCTTTGCTAGCTCGCCTGCATTTCCAAGTTATATGACACCCACACAGTCAGCAAAGTCTAAGTCTAAAATGTCCAGCTCAGTGGGGCCAGAGAGAAATGGAACCCCAGTCAAGGCATCTTTCAGTACTGCAAAGAAAAGACTGTCCTTCCCAAACTCTCCTGGTGGTTCAAGGAGACATTCTTTGCCCCCCCCAAAGGTAGATATTAGCCCTGTCGAGAACATTGCAATTATGCAGATTAAGCTACTGACAGAGGAAGTAGGTAGTGCAGAATTGTGGTGA 1494 0.4605 MGKRSWFFAVKKVLSPDSKEKKDQLAKQSSSKSKKKWFGKSKHSSQIFLSDKEVASAVPPPLTRIVDAKLIEAENEQSKHAYSVALATAVAAEAAVAAVQAAAEVVRLTSVSRITGKSSEEIAAIRIQAAFRGYMARRALRALKGLVRLKTLIQGQSVQRQALTTLKCMHTLSRLQSQIRARRIRMSEENQALQSQLQQKREKEHEKSQTSVDKVDDWNHSPGSRELVEKKILSKQEASIRRERALAYAYSHQQMWKNASKSANPKFMDPNNPHWGWSWLERWMAARSWENRSTTYNNDHASVRSGATSHTPFVGEISISNSLREKPSPAGKKSSQPPSRRQSSPSVPSKAPSSSSTAEKTKPPSPKGSSSIWGGDADSRSMFSIQSERYRRHSVGGSSARDDESFASSPAFPSYMTPTQSAKSKSKMSSSVGPERNGTPVKASFSTAKKRLSFPNSPGGSRRHSLPPPKVDISPVENIAIMQIKLLTEEVGSAELW* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01524 497 MobiDBLite consensus disorder prediction 319 472 - -
Pte5g01524 497 MobiDBLite consensus disorder prediction 16 43 - -
Pte5g01524 497 Coils Coil 183 206 - -
Pte5g01524 497 MobiDBLite consensus disorder prediction 190 222 - -
Pte5g01524 497 Pfam IQ calmodulin-binding motif 123 141 IPR000048 GO:0005515
Pte5g01524 497 ProSiteProfiles IQ motif profile. 120 148 IPR000048 GO:0005515
Pte5g01524 497 MobiDBLite consensus disorder prediction 16 30 - -
Pte5g01524 497 MobiDBLite consensus disorder prediction 319 384 - -
Pte5g01524 497 MobiDBLite consensus disorder prediction 198 222 - -
Pte5g01524 497 MobiDBLite consensus disorder prediction 401 460 - -
Pte5g01524 497 PANTHER IQ-DOMAIN 5-RELATED 1 468 - -
Pte5g01524 497 SMART iq_5 119 141 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01524 Pte-Chr5 37615881 37619881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01524 1 468 IQD Protein Family AT3G52290 52.110 3.32e-118 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01524 - - tcc:18586349 506.908