Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01523 ATGCAGCTTTCGCTTTCTGTCTTCTCTGTTCACCTTTTTCTTTTTACTACTGTACTGTACCATAGTTCTGTAAAGGGCAAAAGACTTCAACCTCCCCTGAGAGGTGTCAGGAAGAGGCCATGGGGTCGTTATGCAGCTGAGATACGGGACCCATGGAAGAAAACAAGAGTTTGGTTGGGCACATTCGACACGCCTGAAGAAGCAGCTCTTGCCTATGACGGTGCTGCTCGTTCCCTGCGTGGACCCAAAGCCAAAACAAAATAG 264 0.4848 MQLSLSVFSVHLFLFTTVLYHSSVKGKRLQPPLRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTK* 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01523 87 CDD AP2 34 86 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 33 86 - -
Pte5g01523 87 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 ProSiteProfiles AP2/ERF domain profile. 32 87 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 Pfam AP2 domain 34 81 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 FunFam Ethylene-responsive transcription factor 2 32 87 - -
Pte5g01523 87 SMART rav1_2 32 87 IPR001471 GO:0003700|GO:0006355
Pte5g01523 87 Gene3D AP2/ERF domain 33 87 IPR036955 GO:0003700|GO:0006355
Pte5g01523 87 SUPERFAMILY DNA-binding domain 33 85 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01523 Pte-Chr5 37611761 37612868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01523 34 87 AP2-EREBP Transcription Factor Family AT1G28360 94.444 1.18e-31 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte5g01523 AP2 2.5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01523 - - atri:130815934 116.316