Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01519 ATGGAATACCATGTTGAAACTCCCGCAACTACCTCCCCACTACCTTTGGTACCTTCATCTCCTTCATCTTCTTCTCCTGCTAATGCTCAGTTGTCGCCAACAACTCCTTCTCCGAACAGTACTTCTCATCGGTCTGCTTTTCCTACTGTCCCTGCAATTGTTGTTAGTCCCTGTGCAGCCTGCAAGATCCTTCGTTATAGATGCGTTGAAAAATGTGTTTTAGCTCCATATTTCCCTCCCACTGATCGATTCAAGTTCACCCATGCGCATAGGGTCTTTGGAGCTAGCAATATCATCAAGTTCTTGCCGGAACTCCCAGGCGGTGAGAGAGCAGATGCTGTAAGCAGTATGGTTTATGAAGCCAATGCAAGGATTAGAGACCCAGTGTATGGCTGTGCTGGAGCAATATTTCAACTTCAAAAACAAGTTGGTGAGCTACAAGCAGAACTAGCCAAAGCACAAGCAGAGATTTTCAACATGCAATGCCAACAAGGCAACTTGGTGGCGCTAATTTGCATGGAAATGAGTCAATCGCGAGATCAGATGATGCTGCAGCCTCAATCTCAACATACTGACATGACCTATTTCATAGATGAGAATATGATGGCCTCTTCTTGGGCATGA 624 0.4551 MEYHVETPATTSPLPLVPSSPSSSSPANAQLSPTTPSPNSTSHRSAFPTVPAIVVSPCAACKILRYRCVEKCVLAPYFPPTDRFKFTHAHRVFGASNIIKFLPELPGGERADAVSSMVYEANARIRDPVYGCAGAIFQLQKQVGELQAELAKAQAEIFNMQCQQGNLVALICMEMSQSRDQMMLQPQSQHTDMTYFIDENMMASSWA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01519 207 ProSiteProfiles LOB domain profile. 56 157 IPR004883 -
Pte5g01519 207 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 56 189 - -
Pte5g01519 207 Pfam Lateral organ boundaries (LOB) domain 57 154 IPR004883 -
Pte5g01519 207 Coils Coil 136 163 - -
Pte5g01519 207 MobiDBLite consensus disorder prediction 1 43 - -
Pte5g01519 207 MobiDBLite consensus disorder prediction 12 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01519 Pte-Chr5 37591759 37593792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01519 53 205 AS2 family AT1G07900 64.052 2.03e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte5g01519 LOB 6.9e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01519 - - gmx:100806667 253.062