Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01510 ATGGACCAGAAAAACACAGCAACCACGCCGTCATTAACGGGCAGCAGGGCCAGGTCCAAGAACTCGGTGTTGCCGTATCAAACGCAAAGACTTAGAGACCATTACCTTATGGGCAAGAAGCTAGGCCAAGGTCAATTTGGTACAACGTATCTGTGTATCCACAAAACAACTGGCAAACAATTCGCCTGCAAGTCGATCCCAAAGCGGAAACTCTTGTGTAGGGAGGACTACGAGGATGTGTGGAGGGAGATTCAGATCATGCATCACTTGTCCGAGCACTCAAATGTGGTCAGAATCGAAGGGACGTACGAGGATTCTGTCTTTGTCCACTTGGTCATGGAGCTATGTGCTGGGGGTGAGCTTTTTGATAGGATTATCCAAAAGGGACATTTTAGTGAGAAAGAGGCTGCCAAGTTGATCAAGGTTATTGTGGGGGTTGTTCAGGCTTGCCATTCTCTTGGGGTCATTCATAGAGATCTCAAACCTGAGAATTTCTTGTTTGATAGTCCTAGTGAGGATGCTAAGCTTAAAGCTACAGATTTTGGCTTATCTGTATTCTATCAGCCAGGGCAATCCTTTTTTGATGTAGTTGGTAGTCCTTACTATGTCGCGCCTGAAGTACTATTGAAGCATTATGGGCCAGAAGTTGATGTATGGAGTGCTGGTGTTATCCTCTATATCTTGTTAAGTGGGGTTCCTCCTTTTTGGGCAGACAATGAGTCAGGAATTTTCAGACAGATTTTGCATGGATCATTGGATTTTAATTCCGAACCGTGGCCTAATATTTCAGAAAGTGCCAAAGATTTGATACTGAAGATGCTTGAACGGGATCCTAAACAAAGAATAACTGCACATGAAGCACTATGTCACCCTTGGATTGTAGATGATAGAGTTGCACCAGACGAACCTCTAGATTCAGCAGTATTGTCACGTCTAAAACATTTCTCAGGAATGAACAAACTGAAGAAGATGGCACTGCGAGTAATTGCAGAGAGGCTTTCAGAAGAAGAGATTGGTGGTCTGAAAGCGCTGTTCAGAATGATTGACACAGACAATAGTGGAACGATTACATTTGAGGAGTTGAAAGAAGGGTTGAAAAAAGTAGGTTCAAACCTTATGGAAGATGAAATCAAGTCCCTTATGGATGCAGCTGATATAGACAACAGTGGCACAATAGACTACGGTGAATTTCTCGCTGCTACTTTGCACTTGAATAAAATGGAGAGGGAGGAGAACCTGGCTGCAGCATTCTCGTACTTTGACAAAGATGGTAGTGGTTACATTACCATTGATGAACTTCAACAGGCTTGCAAAGAATTTGGCCTAGGTGATGTCCATCTCGATGATATGATCAAAGAGATCGACCAAGACAATGATGGACGAATTGATTATTCGGAGTTTACAGCGATGATGAAAAAGGTGGATGGAGGAGTTGGCAGGAGCAGAACAATGAGGGGAAACTTGAACTTCACTCTAGCTGATGCTTTTGGAGTTAACACATCCTGA 1506 0.4343 MDQKNTATTPSLTGSRARSKNSVLPYQTQRLRDHYLMGKKLGQGQFGTTYLCIHKTTGKQFACKSIPKRKLLCREDYEDVWREIQIMHHLSEHSNVVRIEGTYEDSVFVHLVMELCAGGELFDRIIQKGHFSEKEAAKLIKVIVGVVQACHSLGVIHRDLKPENFLFDSPSEDAKLKATDFGLSVFYQPGQSFFDVVGSPYYVAPEVLLKHYGPEVDVWSAGVILYILLSGVPPFWADNESGIFRQILHGSLDFNSEPWPNISESAKDLILKMLERDPKQRITAHEALCHPWIVDDRVAPDEPLDSAVLSRLKHFSGMNKLKKMALRVIAERLSEEEIGGLKALFRMIDTDNSGTITFEELKEGLKKVGSNLMEDEIKSLMDAADIDNSGTIDYGEFLAATLHLNKMEREENLAAAFSYFDKDGSGYITIDELQQACKEFGLGDVHLDDMIKEIDQDNDGRIDYSEFTAMMKKVDGGVGRSRTMRGNLNFTLADAFGVNTS* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01510 501 SMART efh_1 376 404 IPR002048 GO:0005509
Pte5g01510 501 SMART efh_1 412 440 IPR002048 GO:0005509
Pte5g01510 501 SMART efh_1 446 474 IPR002048 GO:0005509
Pte5g01510 501 SMART efh_1 340 368 IPR002048 GO:0005509
Pte5g01510 501 Pfam EF-hand domain pair 411 472 IPR002048 GO:0005509
Pte5g01510 501 Pfam EF-hand domain pair 341 401 IPR002048 GO:0005509
Pte5g01510 501 ProSiteProfiles EF-hand calcium-binding domain profile. 372 407 IPR002048 GO:0005509
Pte5g01510 501 SMART serkin_6 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01510 501 Gene3D Transferase(Phosphotransferase) domain 1 121 303 - -
Pte5g01510 501 SUPERFAMILY EF-hand 332 475 IPR011992 -
Pte5g01510 501 SUPERFAMILY Protein kinase-like (PK-like) 31 306 IPR011009 -
Pte5g01510 501 ProSiteProfiles EF-hand calcium-binding domain profile. 446 477 IPR002048 GO:0005509
Pte5g01510 501 Gene3D Phosphorylase Kinase; domain 1 36 120 - -
Pte5g01510 501 MobiDBLite consensus disorder prediction 1 23 - -
Pte5g01510 501 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Pte5g01510 501 ProSitePatterns EF-hand calcium-binding domain. 421 433 IPR018247 -
Pte5g01510 501 ProSitePatterns EF-hand calcium-binding domain. 455 467 IPR018247 -
Pte5g01510 501 Gene3D - 304 476 - -
Pte5g01510 501 ProSitePatterns EF-hand calcium-binding domain. 385 397 IPR018247 -
Pte5g01510 501 FunFam CDPK-related kinase 3 27 195 - -
Pte5g01510 501 ProSiteProfiles EF-hand calcium-binding domain profile. 336 371 IPR002048 GO:0005509
Pte5g01510 501 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 467 - -
Pte5g01510 501 ProSitePatterns Protein kinases ATP-binding region signature. 41 64 IPR017441 GO:0005524
Pte5g01510 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Pte5g01510 501 FunFam Calcium-dependent protein kinase 1 37 120 - -
Pte5g01510 501 ProSiteProfiles EF-hand calcium-binding domain profile. 408 443 IPR002048 GO:0005509
Pte5g01510 501 FunFam Calcium-dependent protein kinase SK5 203 298 - -
Pte5g01510 501 CDD STKc_CAMK 34 292 - -
Pte5g01510 501 FunFam Calcium-dependent protein kinase 1 301 475 - -
Pte5g01510 501 ProSiteProfiles Protein kinase domain profile. 35 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01510 501 Pfam Protein kinase domain 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01510 Pte-Chr5 37508905 37513922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01510 18 499 EF-hand Containing Proteins AT1G35670 83.610 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte5g01510 Pkinase 1.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01510 K13412 - jre:108991330 864.759