Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte5g01507 | ATGAGTGTAAACGAAGCCAAAGCCTGTGAAAACGATAGGTCGATCGCCAGTTCATCAGATGCAATGCATTATAGTAACATGAAAGGGGTTGATCACAGAATGGAACAGCTGGAATCACGTGTACCGCCAGGATTTAGATTTCATCCAACAGAGGAAGAACTTGTTGGGTACTATCTCAAGAGGAAGATCGATTCTCTTAAAACTGATTTGGAAGTTATTATGGAGATTGATCTCTACAAAATTGAACCATGGGACATACAAGGTACTACATACCTACATAAGTAA | 285 | 0.3965 | MSVNEAKACENDRSIASSSDAMHYSNMKGVDHRMEQLESRVPPGFRFHPTEEELVGYYLKRKIDSLKTDLEVIMEIDLYKIEPWDIQGTTYLHK* | 95 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte5g01507 | 94 | Pfam | No apical meristem (NAM) protein | 42 | 89 | IPR003441 | GO:0003677|GO:0006355 | |
Pte5g01507 | 94 | SUPERFAMILY | NAC domain | 37 | 90 | IPR036093 | GO:0003677|GO:0006355 | |
Pte5g01507 | 94 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Pte5g01507 | 94 | ProSiteProfiles | NAC domain profile. | 41 | 94 | IPR003441 | GO:0003677|GO:0006355 | |
Pte5g01507 | 94 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 38 | 87 | - | - | |
Pte5g01507 | 94 | Gene3D | NAC domain | 50 | 94 | IPR036093 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte5g01507 | Pte-Chr5 | 37497142 | 37499075 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte5g01507 | 37 | 92 | NAC Transcription Factor Family | AT1G71930 | 71.429 | 7.09e-25 | 93.2 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Pte5g01507 | NAM | 9.4e-13 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte5g01507 | - | - | cic:CICLE_v10003255mg | 102.834 |