Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01501 ATGGGCAGGTATGACTATGAGTTCAGTATTTCTTTCCTACATGTCTTTTTATGTTGTTCCATCTTGTTGTTTCCATTGGTTTTGTCTCAACTGTCTAAAACCCAAATGGAAACTATGGGCAAACTCTCGGAGCTGCTTAATGGAAGTGTTCCAGCATGGGATATCAAGAAGGAGCCTAATCCATGTTTGTGGGATGGAGTCAATTGCAACCCGAGTAATTCATCTGTAGTTGAAATTGCTTTATCTGGGAATTCTTTATCTTCCGCAGATTTTTTGTCTGTACTGTGTCGGATTGATTCGTTGGAGACGATTGATGTCTCTCACAACCTTTTGAGCTCGATTCCAGATGAGTTTATCACAGGTTGTGGGATGATTCGTGAGATAAAGCTGTTGAATTTTAGCAGAAATGAACTATCTGGGTCTGTCCCTACTTTCCATGGTTTCTCTGGGTTGGAACATCTGGACTTGTCTTTCAATAGCTTTGACGGAAATATTGATTTGCAGTTTGATGGGTTAGTAAGTTTGAAAAGTTTGAACCTCAGTAACAACCATCTTAATGGGTCTATTCCAACCAATCTCGGAAAAGCCAAGGTTTTGGAGCAACTTGTGCTAGCTGGTAATAATTTCAATGGTAGCATCCCATCTGAAATTGTGAGTTATACAGATCTAGCAATGGTCGATCTTAGTGGAAACCAGCTTTTTGGGTCTATTCCTGATGAGATTGAGAAGCTGTCCAAGTTGGAAACTTTGATTCTTTCTTCTAATAAACTAAGTGGGCAAATACCCTTGAGCATTTCCAAAACCGCCACGATTACACGTTTTGCTGCGAATGAAAATAAGTTTACTGGTTACATACCGAAAGGAATTACAAAATTTCTCAGGAGTCTGGATCTTAGCTACAATAATTTAAGAGGGACAATCCCATCAGACCTTCTATCACCATTGCAATTGTTGGTTGTGGATTTATCCAATAATAGTTTAACTGGTGAGATACCTAGTAATTTGTCGGTTAATTTAGTCAGATTGAGATTGGGGAATAATAATCTCAATGGGACAATACCCTCAGCAAGATACGGAAACCTTAATAAATTGGTATACTTGGAGTTGGAGGCAAATAAGTTGGTTGGATCGGTACCTCCGCAATTGGGGTTATGCCAGAATTTGGCTCTGTTGAATTTGGCTCAAAATGAACTTTCTGGTATGTTGCCATTAGAATTGGGAAATCTTGTCAATCTCCAGGTTTTGAAGCTTCAGATGAACAAGCTTGTTGGACCAATCCCAACTCAAATTTCGCAATTGCAGAAGTTGGCAACTCTGAATTTCAGCTCAAATTCACTGAATGGTTCTATACCATCCTCAATATCAAACTTGAGAAACCTTACTAACCTGAACTTACAGAAGAACAATCTCATCGGATCTATTCCTGCTTCCATTGGCAGCATGGATGCATTGATAGAGCTTCAACTTGGAGAAAACCAACTAAGTGGCGACATTCCCAAGATGCCATCTGGTTTACAGATTGCCTTGAATCTCAGTAGCAACCTTTTTGAAGGAACCATCCCCAGCAATCTCTATACTTTAACTAAGTTAGAAGTATTAGATCTCTCAAATAACAAATTTTCTGGGGTTATTCCTGATTTTCTGACGAAAATGCAGACCTTGACACAATTGATACTTTCTAACAATCTGCTCTCTGGTGCAGTTCCAAAGTTCGGTGCATGGGTTAAACTGGATTATAGTGGAAATAAAGTTGTTAATATAACTACCCCTCCAAACATCTTGGCTCTGAAGAAGAATAAATATAATACTGTTGCTGTGGCAGTTTCTATTGCTGTTGCAGCAGCTGTTGTTGGAATACTCGCTATCCTGGCTATATCAATTTCAAGGCGGTATTATAGGGTTAAGGATGAAAGGTCACAGATTGGAGATGATTTTCAGCTTCCTCCTATAATTCAAGGGGCAATGTTAACTCCAAATGCTATTCACAGATCAAATATAGACTTCTCTAAAGGCATCGAAGCTGATTCGGATTTGTCAAACATCGTCCTCAAGACCCGGTTTTCCACTTATTACAAGGCGATCATGCCCTCTGGAACGACCTACTTGGTAAAGAAGCTTAACTGGATTGATAGGGTATTCCCACTGGGTAACCATGATAAATTTGGGAGAGAGCTCGAGTTATTGGGGAAACTGAACAACTCAAACATCATGACGCCTTTGGCTTATGTTCTTTCTTTAGATAGTGCTTATATATTCTATGAATTTGCTTCAGAAGGCAGTCTCTTTGATGTTCTTCATGGAAGTTCCACAAATGTTCTAGATTGGGGAAGTCGATATAGCATTGCTGTTGGAGTAGCTCAAGGTCTTGCTTTTCTCCATGGTTGTAACTCTGGTCCGATAGTTCTTCTTGACTTTTCAAGTAGAAGCATTTTGTTGAAATCTCTGAAAGAGCCACTTGTTGGAGATATTGAACTCCTTAAGGTGATTGATCCTTCAAAAAGTACCGGAAGCCTTTCTACTGTTGCTGGTTCTGTTGGCTATATTCCTCCAGAATATGCATACACAATGAGAGTTACAGCAGCTGGAAATATCTATAGCTTCGGAGTGGTTCTTCTAGAACTGTTGACAGGAAAACCGGCAGTCACTGACGGAACTGAATTGGTCAAGTGGGTTTCGCGTTTCTCAAATCAGCAAGATCACATCCTTGACTACAATATAAGCAGAACATCACCTGCTGTGAGAAGCCAGATGCTTGCTGTTCTGAAAGTGGCCCTCAGTTGTGTTAGTTTATCGCCAGAAACAAGGCCAAAGATGAAGAGTGTGCTACGTATGCTCCTCAATGCCAGATAG 2850 0.4007 MGRYDYEFSISFLHVFLCCSILLFPLVLSQLSKTQMETMGKLSELLNGSVPAWDIKKEPNPCLWDGVNCNPSNSSVVEIALSGNSLSSADFLSVLCRIDSLETIDVSHNLLSSIPDEFITGCGMIREIKLLNFSRNELSGSVPTFHGFSGLEHLDLSFNSFDGNIDLQFDGLVSLKSLNLSNNHLNGSIPTNLGKAKVLEQLVLAGNNFNGSIPSEIVSYTDLAMVDLSGNQLFGSIPDEIEKLSKLETLILSSNKLSGQIPLSISKTATITRFAANENKFTGYIPKGITKFLRSLDLSYNNLRGTIPSDLLSPLQLLVVDLSNNSLTGEIPSNLSVNLVRLRLGNNNLNGTIPSARYGNLNKLVYLELEANKLVGSVPPQLGLCQNLALLNLAQNELSGMLPLELGNLVNLQVLKLQMNKLVGPIPTQISQLQKLATLNFSSNSLNGSIPSSISNLRNLTNLNLQKNNLIGSIPASIGSMDALIELQLGENQLSGDIPKMPSGLQIALNLSSNLFEGTIPSNLYTLTKLEVLDLSNNKFSGVIPDFLTKMQTLTQLILSNNLLSGAVPKFGAWVKLDYSGNKVVNITTPPNILALKKNKYNTVAVAVSIAVAAAVVGILAILAISISRRYYRVKDERSQIGDDFQLPPIIQGAMLTPNAIHRSNIDFSKGIEADSDLSNIVLKTRFSTYYKAIMPSGTTYLVKKLNWIDRVFPLGNHDKFGRELELLGKLNNSNIMTPLAYVLSLDSAYIFYEFASEGSLFDVLHGSSTNVLDWGSRYSIAVGVAQGLAFLHGCNSGPIVLLDFSSRSILLKSLKEPLVGDIELLKVIDPSKSTGSLSTVAGSVGYIPPEYAYTMRVTAAGNIYSFGVVLLELLTGKPAVTDGTELVKWVSRFSNQQDHILDYNISRTSPAVRSQMLAVLKVALSCVSLSPETRPKMKSVLRMLLNAR* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01501 949 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 756 949 - -
Pte5g01501 949 Pfam Leucine Rich Repeat 293 311 IPR001611 GO:0005515
Pte5g01501 949 Pfam Leucine Rich Repeat 174 192 IPR001611 GO:0005515
Pte5g01501 949 ProSiteProfiles Leucine-rich repeat profile. 100 121 IPR001611 GO:0005515
Pte5g01501 949 Pfam Protein kinase domain 687 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01501 949 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 333 587 - -
Pte5g01501 949 Gene3D Transferase(Phosphotransferase) domain 1 757 949 - -
Pte5g01501 949 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 645 755 - -
Pte5g01501 949 SUPERFAMILY L domain-like 57 291 - -
Pte5g01501 949 Gene3D Ribonuclease Inhibitor 290 591 IPR032675 -
Pte5g01501 949 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 33 192 - -
Pte5g01501 949 SUPERFAMILY Protein kinase-like (PK-like) 684 945 IPR011009 -
Pte5g01501 949 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 238 331 - -
Pte5g01501 949 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 216 945 - -
Pte5g01501 949 Pfam Leucine rich repeat 509 564 IPR001611 GO:0005515
Pte5g01501 949 Pfam Leucine rich repeat 100 160 IPR001611 GO:0005515
Pte5g01501 949 ProSiteProfiles Protein kinase domain profile. 676 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01501 949 Gene3D Phosphorylase Kinase; domain 1 665 755 - -
Pte5g01501 949 Gene3D Ribonuclease Inhibitor 189 289 IPR032675 -
Pte5g01501 949 Gene3D Ribonuclease Inhibitor 31 188 IPR032675 -
Pte5g01501 949 SUPERFAMILY RNI-like 202 570 - -
Pte5g01501 949 SMART LRR_typ_2 527 550 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 290 314 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 98 121 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 244 268 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 409 433 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 457 481 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 361 385 IPR003591 -
Pte5g01501 949 SMART LRR_typ_2 172 196 IPR003591 -
Pte5g01501 949 PRINTS Leucine-rich repeat signature 527 540 - -
Pte5g01501 949 PRINTS Leucine-rich repeat signature 293 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01501 Pte-Chr5 37429723 37433981 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01501 149 949 Receptor kinase-like Gene Family AT2G41820 39.809 2.43e-160 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte5g01501 Pkinase 8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01501 - - qsa:O6P43_004096 1157.9