Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01495 ATGGAGGATATCCCAGAAGAGCTTTTGAAACTCAGCCTTGCGATTGTTACAGATGGTGGAGGGGAGAAGAAGAAAGAAAGGAAGACCAGCAATTCTTCGTTGTCATTGAATTCATATGAAGGTTATGAAGGAAAAGCATTTTGGTTACTGCAGAAGAGGGAGCAAATGATAAAGGAAGGCCACAAGGAGAAAGCTCTAGCTGAAAATGGAAATGGTCTTCATTTGATCCATTTGTTGCTCTTGACGGCTAAAGAAGTGGAAGACAACAATTTAGACATGGCCTTCGATAATCTGACTGAGCTCTATGAAAATGTGTCCCTATCTGGGGGTTCAGTTCAAAGGGTTGTAGCTTATTTTGCAGATGGACTGACAGCAAGGCTTCTCAAAAGAAAGTCTCCCTTTTACGATATTCTCATTAAGGAACCAACATATGAAGCAGAATTCCAAGCATTCACCGACCTCTACCGGGTTTCGCCGTACTACCAATTTGCTCATTTTACAGCAAATCAAGCAATCATAGAAGCCTTTGAGAGTGAAGAACATTGGAACAGTGGCGCCTTGCATGTGATCGATTTCGATGTCTCATATGGCTTTCAATGGCCGTCTCTTATTCAGTCACTTTCAGAAAAGGCATCAAGTATCAATAGAATATCTCTTAAGATTACTGGGTTTGGAGCAAACATTCAGCAACTCCAGGAAACCGAGTTGAGATTGGTTAATTTCACAAATGGTTTTCGCAATATAATCTTCGAATTCCAAGGCTTGATGAGAGGCTCAAAGGTTGGTTGCATAAGGAGGAAGAAAAATGAAACAGTAGCAGCAAACTTGGTTTTTCATTTGAATACATTGGATAACTATTCAAATATATCTGATACATTGAGATTTGTACATACCCTATTTCCATCTGTTGTGGTCCTAGTAGAACATGAAGGTAGCAGAAAAAGTCCAAGAAGCTTCTTGCCAAGATTCATGGAGTCTTTGCATTATTTTGCAGCAATGTTTGATTCGTTGGATGATTGCCTTCCACTTGACAGTACTGACAGGTTGGGGATAGAGAAGAATCTTCTTGGGAAACAGATCAAGACCACTCTCAACACTGACACGAATTCTTCAAATTGTGCAAAACATGAAAAGATGGAAACATGGAAGGGAAGGATGAAGAACCATGGATTTGAGGGAGTTAAGTTAAGCTCAAAGTCTATAATTCAAGCAAAACTGCTTCTTAAGATTAGAACACAGCATTGCCCTATCCAACTCGACAAGGGGGCTGGTGGGTTTAAGGTGACTGAAAGAGATGATGGAAGAGCTCTATCTTTAGGCTGGAGAGATACATTTCTGCTTACAGCCTCCACATGGCACTGTATATGA 1368 0.405 MEDIPEELLKLSLAIVTDGGGEKKKERKTSNSSLSLNSYEGYEGKAFWLLQKREQMIKEGHKEKALAENGNGLHLIHLLLLTAKEVEDNNLDMAFDNLTELYENVSLSGGSVQRVVAYFADGLTARLLKRKSPFYDILIKEPTYEAEFQAFTDLYRVSPYYQFAHFTANQAIIEAFESEEHWNSGALHVIDFDVSYGFQWPSLIQSLSEKASSINRISLKITGFGANIQQLQETELRLVNFTNGFRNIIFEFQGLMRGSKVGCIRRKKNETVAANLVFHLNTLDNYSNISDTLRFVHTLFPSVVVLVEHEGSRKSPRSFLPRFMESLHYFAAMFDSLDDCLPLDSTDRLGIEKNLLGKQIKTTLNTDTNSSNCAKHEKMETWKGRMKNHGFEGVKLSSKSIIQAKLLLKIRTQHCPIQLDKGAGGFKVTERDDGRALSLGWRDTFLLTASTWHCI* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01495 455 ProSiteProfiles GRAS family profile. 66 453 IPR005202 -
Pte5g01495 455 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 63 448 IPR005202 -
Pte5g01495 455 Pfam GRAS domain family 75 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01495 Pte-Chr5 37348186 37349553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01495 78 452 GRAS Transcription Factor Family AT2G04890 34.026 4.98e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g01495 GRAS 8.3e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01495 - - vvi:100242818 622.083