Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01494 ATGGAAGACCTTGAGGAAGAAGAGCTTTTGAAACTCAGTCTTGCAACCGGTGAAAAGAAGAAGCAGCAGCAGAACCAGAAGCAAAGGAATGCGGAGATCGAAGCTTTGTGCCCCTTGAATTCCTACGGCGATATCGAAAGAAACATTTTGAGTCTCCTTCAACTGAGAGAACGAACGCTAACACGAGATTGCAAAAGCCAAGGATCACTTGATTGTGGACATGATGGCCAGAGTGATCTCATTCATTTATTGCTCACAACTGCCATAGCAGTTGATGAAAACAATGTGTATTCTGCCTTGGAATATCTAAGTGAGATGTACGGAAGTGTAACTTTAACTGGTAATTCTATACAGAGAGTAGTGGCCTACTTTGCTGATGGATTGGCTGCCAGACTTCTGACGCCAACATCTCCATTTTTTGAAGTGATCATGAGGGAACCAACAAAGGAAGAAGAATTCAAGGGATTCGCAGACTTTTATCGCGTATCACCATACTACCAATTCGCTCATTTCACAGCAAACCAAGCTATAATGGAGACCTTTGAGAAAGAGGAAGAGATTAACAACCGGGTACTACATGTAATTGATTTTGATGTCTCCTATGGCTTCCAGTGGCCTTCTCTGATACAATCACTCTCTGCAAAGGCATCAAGTTGCAATTGCATACATCTCAGGATAACTGGGTTTGGAAGAAACTTGGAAGTGCTACAAGACACTGAGGCCAGTCTGGTTAGCTTCTCAAAGGGTTTTCATAATCTGGTCTTTGAATTCCAAGGATTGTTGAGAGGCTCATCTGTTGTTAACTTAATTACAAAAGGCACCGAGACACTTGCTGTAAACTTGGTTCTCCATTCTTTGAATAAGTTTTTCAGTGTATCAGAAATACTGAAGTTCATTCGCTCACTGAATCCCTCAATAGTTGTGTTGGTGGAACGGGATTACAGCAGTAGAGGTTCTCCAAGCTTTTTGGCAAGGTTCATGAAGTCCTTGCATTATTTTGAAGCCCTTTTTGATTCATTGGACGATTGCCTCCCACTTGAAAGTATTGAAAGGTTGGGTATTGAGAAAAGTCTTCTTGGTAAAGAGATCAGAAGCTTGCTCAACTACGACGTAGACTGTATGACCCGTGTCAGACATGACATGATGGAATCATGGAAACCAAGCATGGAGAACCATGGATTTGCAGCATGTAAGTTCAGCTCAAAGGCTGTAATTCAAGCAAAACTACTTTTGAAGATTAAGAGTCATTATTGTCCTCTCCATTTTGATGGAGAAGGAGGTGGTGGTGGGTTTAGGATTTCTGAAAGAGATGAGGGAAGAGCTATTTCATTGGCTTGGCAAGATAGATTTCTGCTCACAGCTTGTGCATGGCACTGA 1377 0.4198 MEDLEEEELLKLSLATGEKKKQQQNQKQRNAEIEALCPLNSYGDIERNILSLLQLRERTLTRDCKSQGSLDCGHDGQSDLIHLLLTTAIAVDENNVYSALEYLSEMYGSVTLTGNSIQRVVAYFADGLAARLLTPTSPFFEVIMREPTKEEEFKGFADFYRVSPYYQFAHFTANQAIMETFEKEEEINNRVLHVIDFDVSYGFQWPSLIQSLSAKASSCNCIHLRITGFGRNLEVLQDTEASLVSFSKGFHNLVFEFQGLLRGSSVVNLITKGTETLAVNLVLHSLNKFFSVSEILKFIRSLNPSIVVLVERDYSSRGSPSFLARFMKSLHYFEALFDSLDDCLPLESIERLGIEKSLLGKEIRSLLNYDVDCMTRVRHDMMESWKPSMENHGFAACKFSSKAVIQAKLLLKIKSHYCPLHFDGEGGGGGFRISERDEGRAISLAWQDRFLLTACAWH* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01494 458 ProSiteProfiles GRAS family profile. 71 458 IPR005202 -
Pte5g01494 458 Pfam GRAS domain family 80 457 IPR005202 -
Pte5g01494 458 Coils Coil 14 34 - -
Pte5g01494 458 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 58 453 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01494 Pte-Chr5 37336399 37337775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01494 77 459 GRAS Transcription Factor Family AT2G04890 33.333 1.51e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte5g01494 GRAS 2.3e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01494 - - pper:18768855 540.036