Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01492 ATGAATTTGAGTTGTAGCAGCTTTAATGGTCAAATTCCCTATGAAATAGGCACTTTGCGCTCTTCGGAAAATCTCGATCTTAGCCATAATCATTTGACTGGCAAGATTCCGCAGCAACTTGGAGATTTGGACAATTTGGAAAATCTTGATCTTTCTCACAATGGACTTTCTGGTTCTATTCCTTCCACTTTCAATTACGTGCAAAGTTTGACGTATGTGGACGTGTCCTACAATCAATTGGAAGGCTCTCTTTCAAACAATAAAGCATTTCATGATGCTACGTTTGAAGACGTTAGAAATAACAAGGGATTGTGTGGTAACAATCCAGGTCTTCATCACTGTCCTACATCTTACGATGTAAATCTTGAGAGACGCAAAAGGAACCTAAAAGTCTCAAAAGTATGGCTTCCAATTTTTCTGTCTACTTTCATCTTCCTTATCTTAGTTATTACACTGTGGAATGCTCTGCACGTCAGAACTAAGAAGTTGGTGAATCAAACCAACAAAACTCGTACTGGTCAGGATCACTTTGCTATATGGAGCTATGATGGGAATATGGTATATCAAGATGTAGTAGAAGCAACACAGGGATTCCGTGTTGAATGTTGCATTGGAGTTAGAGGCTATGGAAGTGTTTACAAGGCATCACTTGGAAGACAACATTTTACCTGTCAGGTTGTTGCAGTGAAGAAACTTCGTGCAGAAGAAGATGGCAGTGCATCCAAGCTGAAGGCTTTCACTAGAGAGGTATATGCCTTGACAGAAATACGCCATCGTCAAATTATAAGGGTTCAGGGTTTTTGCTCACATCCAAGGCATTCATTTTTGGTTTATGAGTTCATAGAAGGTGGGAGCTTATTGAAGATATTACATGATGAGGAACAAGCAGTAAGATTTCATTGGACTAAGAGGGTCAACGTTATTAGAGGAATTGCTAATGCTATCTCCTATATGCACCATGATTGCAAGCCCCCAATTATTCATCGTGACATATCAAGCAAGACGTGTTGCTGGATTCAGAATATGATGCTCATGTTTCTGACTGTGACAGTACCAAACTTTTAG 1065 0.3962 MNLSCSSFNGQIPYEIGTLRSSENLDLSHNHLTGKIPQQLGDLDNLENLDLSHNGLSGSIPSTFNYVQSLTYVDVSYNQLEGSLSNNKAFHDATFEDVRNNKGLCGNNPGLHHCPTSYDVNLERRKRNLKVSKVWLPIFLSTFIFLILVITLWNALHVRTKKLVNQTNKTRTGQDHFAIWSYDGNMVYQDVVEATQGFRVECCIGVRGYGSVYKASLGRQHFTCQVVAVKKLRAEEDGSASKLKAFTREVYALTEIRHRQIIRVQGFCSHPRHSFLVYEFIEGGSLLKILHDEEQAVRFHWTKRVNVIRGIANAISYMHHDCKPPIIHRDISSKTCCWIQNMMLMFLTVTVPNF* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01492 354 ProSiteProfiles Leucine-rich repeat profile. 45 67 IPR001611 GO:0005515
Pte5g01492 354 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 114 - -
Pte5g01492 354 Gene3D Phosphorylase Kinase; domain 1 157 280 - -
Pte5g01492 354 PRINTS Leucine-rich repeat signature 22 35 - -
Pte5g01492 354 PRINTS Leucine-rich repeat signature 43 56 - -
Pte5g01492 354 SUPERFAMILY L domain-like 2 121 - -
Pte5g01492 354 FunFam Leucine-rich repeat receptor protein kinase MSP1 160 280 - -
Pte5g01492 354 Gene3D Transferase(Phosphotransferase) domain 1 281 346 - -
Pte5g01492 354 ProSiteProfiles Protein kinase domain profile. 198 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte5g01492 354 SUPERFAMILY Protein kinase-like (PK-like) 177 334 IPR011009 -
Pte5g01492 354 Gene3D Ribonuclease Inhibitor 1 121 IPR032675 -
Pte5g01492 354 PANTHER LEUCINE RICH REPEAT KINASE 2 1 334 - -
Pte5g01492 354 Pfam Leucine rich repeat 23 80 IPR001611 GO:0005515
Pte5g01492 354 Pfam Protein tyrosine and serine/threonine kinase 204 337 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01492 Pte-Chr5 37326878 37328531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01492 1 87 Receptor kinase-like Gene Family AT4G08850 35.632 4.17e-10 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte5g01492 PK_Tyr_Ser-Thr 1.8e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte5g01492 - - twl:119999520 350.132