Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte5g01488 ATGGATGTAGAGTCTAAGAAACCTTCTTCTCATCTCTCCCAACCACAAATAGGCACAGCAAATACCATTCAGTCTCCTTCCCTTCCCAGCCCAATAAGACAGTTGATCCTTGTTGCTTCCATTGCTGCCGGAATTCAATTCGGTTGGGCGCTTCAGCTGTCTTTGCTAACCCCATATGTTCAACTCCTCGGTATTCCTCACACATGGGCTGCCTTCATTTGGCTCTGTGGTCCGATCTCCGGTTTGCTCGTGCAGCCTATTGTTGGCTTCCATAGCGATCACTGCACCTCTCGCTTCGGTCGCCGTCGTCCTTTCATTGCCATCGGTGCTTTATTCGTAGCTGTTGCTGTCTTCCTCATCGGCTATGCAGCTGACATCGGTCACCTTGCCGGTGATTCCTTAGAGAAAACTAGTAAACCTCGTGCCATAGCTGTCTTTGTCGTAGGTTTCTGGATTCTTGATGTCGCAAACAACATGTTACAAGGTCCTTGTCGTGCTCTCCTAGCCGATCTTTCATCGAGCGATTCTAAAAAAACACGAACAGCCAATGCTTTCTTCTCTTTCTTCATGGCAGTCGGCAACGTTCTTGGTTACGCTGCTGGTTCATACACTCGCTTATACAAAATTTTCCCATTCACAAAAACCAAAGCTTGTGATCTTTACTGTGCAAACCTTAAAAGTTGTTTCTTCCTCTCCATTGCATTGCTTGCTACCCTAACCATCATAGCTCTCTTTTTTGTGAAAGAGAAACAGTGGTCACCCCCTGAAAAGGGAACCGCCGGCGTCGACCATGAAGACGATGAAGCAGAAAGTGGCAGTGGAACTTGCAGGATGCCATTTTTTGGAGAGATAATCGGTGCATTGAAGGACTTGAAGAAACCCATGTGGATTCTGCTGTTGGTGACATGTTTGAATTGGATTGCTTGGTTTCCATTCTTGCTGTTCGACACTGATTGGATGGGTCGGGAGGTGTACGGAGGCAAAGTTGGTGGACAAGGAGCTGAAGCTAAGATGTACGATCTCGGAGTTCGCGCTGGTGCGTTGGGATTGATGTTGAATTCTGTGGTGTTAGGGGTGACATCCTTAGGCGTAGAGGTCATGGCGCGTGGGGTTGGTGGGGTGAAGAGATTGTGGGGTATTGTGAATTTCTTGCTGGCTATTTGTATGGCAATGACAGTGTTGGTCACCAAGATGGCCGCCTCATCTCGACGGTATGAGGTGGTCGGAGGTGGTGCACAGCAGTTGTTGCCGCCATCGGCCGGGGTGAAAGCTGGTGCATTGACTTTGTTTTCTGTGCTGGGTGTGCCTCTAGCGATCACATACAGCATCCCTTTTGCTCTAGCATCTATCTTCAGCTGCAATGCTGGTGCAGGTCAAGGACTTTCCTTGGGGGTTTTGAACCTTTCAATTGTCATACCACAGATGGTGGTATCAGTTGTAAGTGGACCCTGGGATGCACTATTTGGTGGTGGCAACATACCGGCGTTCGTGGTAGGAGCGGTGGCTGCCGCCGCGAGTGGAATTATTGCGTTGACTATGCTTCCTTCTCCGCCTCCTGACGTTCCCTCCTCCAAAAATGCAAGAGCTGCTGCAGCTGTGCCTTTTCACTGA 1611 0.4922 MDVESKKPSSHLSQPQIGTANTIQSPSLPSPIRQLILVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGLLVQPIVGFHSDHCTSRFGRRRPFIAIGALFVAVAVFLIGYAADIGHLAGDSLEKTSKPRAIAVFVVGFWILDVANNMLQGPCRALLADLSSSDSKKTRTANAFFSFFMAVGNVLGYAAGSYTRLYKIFPFTKTKACDLYCANLKSCFFLSIALLATLTIIALFFVKEKQWSPPEKGTAGVDHEDDEAESGSGTCRMPFFGEIIGALKDLKKPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGKVGGQGAEAKMYDLGVRAGALGLMLNSVVLGVTSLGVEVMARGVGGVKRLWGIVNFLLAICMAMTVLVTKMAASSRRYEVVGGGAQQLLPPSAGVKAGALTLFSVLGVPLAITYSIPFALASIFSCNAGAGQGLSLGVLNLSIVIPQMVVSVVSGPWDALFGGGNIPAFVVGAVAAAASGIIALTMLPSPPPDVPSSKNARAAAAVPFH* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte5g01488 536 CDD MFS_SLC45_SUC 35 493 - -
Pte5g01488 536 MobiDBLite consensus disorder prediction 8 25 - -
Pte5g01488 536 PANTHER SUGAR TRANSPORTER 31 513 - -
Pte5g01488 536 Pfam MFS/sugar transport protein 43 250 - -
Pte5g01488 536 SUPERFAMILY MFS general substrate transporter 33 518 IPR036259 -
Pte5g01488 536 NCBIfam sucrose/proton symporter 31 519 IPR005989 GO:0005886|GO:0008515|GO:0015770
Pte5g01488 536 FunFam Sucrose transport protein 29 514 - -
Pte5g01488 536 Gene3D MFS general substrate transporter like domains 29 529 IPR036259 -
Pte5g01488 536 MobiDBLite consensus disorder prediction 1 25 - -
Pte5g01488 536 MobiDBLite consensus disorder prediction 253 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte5g01488 Pte-Chr5 37241812 37244566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte5g01488 29 537 Sucrose Transporter Gene Family AT1G22710 68.885 0.0 700